C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: family with sequence similarity 109, member A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000198324 FAM109A 9606 - 12:111360651-111369121 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000361483 FAM109A-001 111360651-111369121 protein_coding
  ENST00000547710 FAM109A-005 111363077-111369095 protein_coding
  ENST00000547838 FAM109A-007 111360680-111363749 protein_coding
  ENST00000548163 FAM109A-002 111361215-111363712 protein_coding
  ENST00000549321 FAM109A-006 111363204-111369099 protein_coding
  ENST00000624311 FAM109A-201 111360651-111369121 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000361483ENST00000547838ENST00000548163ENST00000549321ENST00000624311
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000361483 0.430±0.00 N/A N/A 0.483±0.00 1.313±0.00 N/A 0.681±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000547838 N/A 0.812±0.00 N/A 0.309±0.00 3.891±0.00 2.621±1.44 0.872±0.00 1.385±0.68 0.728±0.00 3.370±0.00 0.491±0.00 4.577±1.05 2.444±0.27 2.771±0.41
ENST00000548163 0.492±0.00 N/A 0.183±0.00 0.195±0.00 0.877±0.33 N/A 0.276±0.00 N/A N/A N/A 0.094±0.00 0.153±0.00 1.400±0.00 N/A
ENST00000549321 N/A N/A N/A 0.294±0.00 N/A N/A N/A N/A 0.518±0.00 N/A N/A 0.261±0.00 N/A N/A
ENST00000624311 0.810±0.00 N/A 0.160±0.00 0.115±0.00 N/A 1.521±0.00 3.872±0.00 1.652±0.00 0.078±0.00 0.949±0.00 N/A 8.125±5.15 3.582±1.60 3.668±0.79

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008TJ CIL_0008TJ_0001 VISTA 12:110911282-111513646

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001881 IMP receptor recycling
GO:0005515 IPI protein binding
GO:0005769 IDA early endosome
GO:0005802 IDA trans-Golgi network
GO:0007032 IMP endosome organization
GO:0030136 IDA clathrin-coated vesicle
GO:0042147 IMP retrograde transport, endosome to Golgi
GO:0042803 IPI protein homodimerization activity
GO:0055037 IDA recycling endosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000067546 FAM109B family with sequence similarity 109, member B protein_coding Danio_rerio
ENSMUSG00000044134 Fam109a family with sequence similarity 109, member A protein_coding Mus_musculus

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