C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: family with sequence similarity 3, member D
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000198643 FAM3D 9606 - 3:58633946-58666848 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000358781 FAM3D-001 58633946-58666848 protein_coding
  ENST00000482623 FAM3D-004 58637155-58657696 nonsense_mediated_decay
  ENST00000483787 FAM3D-002 58637142-58657766 protein_coding
  ENST00000489857 FAM3D-005 58637152-58666834 protein_coding
  ENST00000498347 FAM3D-003 58643676-58657748 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000358781ENST00000483787ENST00000489857
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000358781 N/A 1.015±0.00 0.040±0.00 N/A 15.663±0.00 11.409±2.92 0.062±0.02 0.094±0.03 5.842±0.00 0.080±0.00 0.201±0.18 0.856±0.23 0.110±0.00
ENST00000483787 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.255±0.00 N/A
ENST00000489857 0.133±0.00 N/A N/A 0.041±0.00 N/A N/A N/A 0.033±0.00 N/A N/A 0.646±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002UQ CIL_0002UQ_0001 CGP 3:58564117-58666848
CIL_0002UR CIL_0002UR_0001 CGP 3:58633946-59050084

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005125 NAS cytokine activity
GO:0005576 NAS extracellular region
GO:0046676 IDA negative regulation of insulin secretion

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045824 FAM3D family with sequence similarity 3, member D protein_coding Danio_rerio
ENSMUSG00000021749 Oit1 oncoprotein induced transcript 1 protein_coding Mus_musculus

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