C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002UQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000168309-ENSG00000198643 CGP 9606 3:58564117-58666848
GeneTranscriptPositionBiotype
ENSG00000168309 (FAM107A)
family with sequence similarity 107, member A 		ENST00000360997 (FAM107A-002) 58564117-58577764 protein_coding
ENST00000394481 (FAM107A-004) 58564117-58577764 protein_coding
ENST00000447756 (FAM107A-003) 58565852-58587113 protein_coding
ENST00000464064 (FAM107A-005) 58565461-58577388 protein_coding
ENST00000465970 (FAM107A-007) 58567219-58627610 protein_coding
ENST00000474531 (FAM107A-001) 58565461-58627610 protein_coding
ENST00000497310 (FAM107A-008) 58608874-58627420 processed_transcript
ENSG00000198643 (FAM3D)
family with sequence similarity 3, member D 		ENST00000358781 (FAM3D-001) 58633946-58666848 protein_coding
ENST00000482623 (FAM3D-004) 58637155-58657696 nonsense_mediated_decay
ENST00000483787 (FAM3D-002) 58637142-58657766 protein_coding
ENST00000489857 (FAM3D-005) 58637152-58666834 protein_coding
ENST00000498347 (FAM3D-003) 58643676-58657748 protein_coding
ENSG00000243384 (RP11-475O23.2)
 ENST00000472513 (RP11-475O23.2-001) 58572744-58574319 antisense
ENSG00000244383 (RP11-475O23.3)
 ENST00000464125 (RP11-475O23.3-001) 58607080-58634440 antisense
CIL_0002UQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021750-ENSMUSG00000021749 CGP 10090 14:8296274-8378763
GeneTranscriptPositionBiotype
ENSMUSG00000021749 (Oit1)
oncoprotein induced transcript 1 		ENSMUST00000022269 (Oit1-201) 8348948-8378763 protein_coding
ENSMUSG00000021750 (Fam107a)
family with sequence similarity 107, member A 		ENSMUST00000036070 (Fam107a-001) 8296274-8309779 protein_coding
ENSMUST00000120411 (Fam107a-003) 8297556-8318023 protein_coding
ENSMUST00000121887 (Fam107a-002) 8296274-8309777 protein_coding
ENSMUST00000137133 (Fam107a-004) 8299539-8309795 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002UQ_0001ENSG00000168309ENST00000360997ENST00000394481ENST00000447756ENST00000464064ENST00000465970ENST00000474531ENST00000497310ENSG00000198643ENST00000358781ENST00000482623ENST00000483787ENST00000489857ENST00000498347ENSG00000243384ENST00000472513ENSG00000244383ENST00000464125CIL_0002UQ_0002ENSMUSG00000021749ENSMUST00000022269ENSMUSG00000021750ENSMUST00000036070ENSMUST00000120411ENSMUST00000121887ENSMUST00000137133
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002UQ_0001ENSG00000168309ENST00000360997ENST00000394481ENST00000447756ENSG00000198643ENST00000358781ENST00000483787ENST00000489857ENSG00000243384ENST00000472513ENSG00000244383ENST00000464125CIL_0002UQ_0002ENSMUSG00000021749ENSMUST00000022269ENSMUSG00000021750ENSMUST00000036070ENSMUST00000120411ENSMUST00000121887ENSMUST00000137133
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000168309 ENST00000360997 4.780±0.00 2.067±0.00 N/A 51.633±0.00 1.721±0.12 1.746±1.41 1.617±0.00 0.168±0.00 2.562±0.00 7.809±0.00 1.648±0.00 0.885±0.59 3.559±3.60 1.589±0.00
ENST00000394481 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.188±0.00 N/A N/A
ENST00000447756 N/A N/A N/A N/A N/A N/A N/A 0.500±0.00 N/A N/A 0.825±0.00 0.497±0.00 N/A N/A
ENST00000464064 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465970 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474531 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497310 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000198643 ENST00000358781 N/A 1.015±0.00 0.040±0.00 N/A 15.663±0.00 11.409±2.92 N/A 0.062±0.02 0.094±0.03 5.842±0.00 0.080±0.00 0.201±0.18 0.856±0.23 0.110±0.00
ENST00000482623 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483787 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.255±0.00 N/A
ENST00000489857 0.133±0.00 N/A N/A 0.041±0.00 N/A N/A N/A N/A 0.033±0.00 N/A N/A 0.646±0.00 N/A N/A
ENST00000498347 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000243384 ENST00000472513 N/A N/A N/A 0.526±0.00 0.060±0.00 N/A 0.053±0.00 N/A N/A N/A N/A 0.146±0.00 N/A 0.073±0.00
ENSG00000244383 ENST00000464125 0.025±0.00 N/A N/A 0.060±0.00 N/A N/A N/A 0.303±0.00 N/A N/A 0.023±0.00 N/A N/A 0.161±0.04
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021749 ENSMUST00000022269 2.350±1.66 0.094±0.03 22.566±3.57 0.025±0.02 1.528±0.26 583.892±79.24 0.632±0.60 0.900±0.17 0.113±0.08 3.680±1.08 N/A 1.971±0.59 0.066±0.03 33.847±4.07
ENSMUSG00000021750 ENSMUST00000036070 1.447±0.73 0.838±0.20 0.555±0.06 6.448±8.98 0.304±0.18 0.437±0.29 0.813±0.29 5.218±0.00 0.046±0.03 3.217±0.28 0.350±0.14 2.425±1.61 0.114±0.07 0.462±0.15
ENSMUST00000120411 N/A N/A N/A N/A 0.135±0.00 0.156±0.00 N/A 29.396±9.62 0.013±0.00 N/A 0.078±0.00 1.421±0.42 0.046±0.00 0.140±0.02
ENSMUST00000121887 0.265±0.16 N/A 0.104±0.03 2.349±2.31 0.211±0.01 0.110±0.03 0.258±0.10 N/A 0.032±0.00 0.914±0.22 0.146±0.04 1.013±0.58 0.102±0.05 0.259±0.00
ENSMUST00000137133 N/A N/A N/A 137.999±0.00 N/A N/A N/A N/A N/A N/A N/A 14.630±0.00 0.129±0.00 3.011±0.00

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