C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RCSD domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000198771 RCSD1 9606 + 1:167630093-167706249 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000361496 RCSD1-005 167630193-167697287 protein_coding
  ENST00000367854 RCSD1-001 167630093-167706249 protein_coding
  ENST00000461790 RCSD1-004 167630266-167641741 processed_transcript
  ENST00000472038 RCSD1-002 167630261-167665040 processed_transcript
  ENST00000475127 RCSD1-003 167630249-167642006 processed_transcript
  ENST00000537350 RCSD1-201 167630093-167706248 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000361496ENST00000367854ENST00000537350
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000361496 N/A N/A N/A 1.395±0.00 1.886±0.00 N/A N/A N/A N/A N/A 5.923±0.00 1.220±0.00 N/A N/A
ENST00000367854 5.755±0.00 16.877±0.00 N/A N/A 5.417±0.00 2.063±0.00 7.321±0.00 N/A 1.220±0.48 2.300±0.00 6.930±0.00 1.288±0.45 6.263±0.56 1.603±0.00
ENST00000537350 1.694±0.00 8.446±0.00 0.345±0.00 0.708±0.00 N/A N/A 0.804±0.00 1.488±0.25 0.435±0.00 4.788±0.00 N/A 0.444±0.00 2.149±0.24 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003009 ISS skeletal muscle contraction
GO:0005884 IC actin filament
GO:0051015 IPI actin filament binding
GO:0071474 IDA cellular hyperosmotic response

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059774 dub duboraya protein_coding Danio_rerio
ENSDARG00000074913 RCSD1 (2 of 2) RCSD domain containing 1 protein_coding Danio_rerio
ENSMUSG00000040723 Rcsd1 RCSD domain containing 1 protein_coding Mus_musculus

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