C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RCSD domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000040723 Rcsd1 10090 - 1:165648945-165708094 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000040357 Rcsd1-201 165648945-165708094 protein_coding
  ENSMUST00000097474 Rcsd1-202 165648945-165708094 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000040357ENSMUST00000097474
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000040357 3.964±0.18 1.426±0.56 3.543±0.06 0.984±0.48 10.913±3.26 1.625±0.50 21.220±1.52 2.049±0.68 2.935±2.76 5.833±1.67 45.301±3.19 4.037±1.26 4.148±2.03 0.430±0.14
ENSMUST00000097474 2.301±0.80 2.682±0.70 1.557±0.36 1.299±0.63 8.005±7.79 1.511±0.87 5.299±0.53 3.207±0.52 0.933±0.51 14.063±3.31 N/A 4.116±1.31 4.432±5.82 1.074±0.92

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008UH CIL_0008UH_0002 VISTA 1:165634234-166236307

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003009 ISS skeletal muscle contraction
GO:0005575 ND cellular_component
GO:0051015 IEA actin filament binding
GO:0071474 IEA cellular hyperosmotic response

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059774 dub duboraya protein_coding Danio_rerio
ENSDARG00000074913 RCSD1 (2 of 2) RCSD domain containing 1 protein_coding Danio_rerio
ENSG00000198771 RCSD1 RCSD domain containing 1 protein_coding Homo_sapiens

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