C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: selenoprotein M precursor
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000198832 SELM 9606 - 22:31104772-31120069 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000400299 SELM-001 31104777-31107568 protein_coding
  ENST00000402395 SELM-002 31104772-31120069 protein_coding
  ENST00000460642 SELM-007 31105025-31107541 processed_transcript
  ENST00000465447 SELM-004 31105439-31107556 retained_intron
  ENST00000465536 SELM-006 31104926-31107528 processed_transcript
  ENST00000469262 SELM-008 31105114-31107466 retained_intron
  ENST00000490967 SELM-003 31104777-31107533 retained_intron
  ENST00000491958 SELM-005 31105001-31107553 processed_transcript
  ENST00000495533 SELM-009 31105013-31105764 retained_intron
  ENST00000611680 SELM-201 31104779-31107568 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000400299ENST00000465447ENST00000465536ENST00000490967ENST00000491958ENST00000495533ENST00000611680
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000400299 N/A N/A N/A 8.205±0.00 N/A N/A 0.283±0.00 0.073±0.00 N/A 0.621±0.00 0.185±0.00 21.438±0.00 57.870±19.87 10.364±0.00
ENST00000465447 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.307±0.00 N/A N/A
ENST00000465536 N/A N/A 0.765±0.00 N/A N/A 1.808±0.00 N/A N/A 3.773±0.00 N/A N/A 5.514±0.00 N/A N/A
ENST00000490967 N/A N/A N/A N/A N/A 0.824±0.00 0.138±0.00 N/A N/A 0.242±0.00 N/A N/A N/A N/A
ENST00000491958 N/A N/A 0.557±0.00 1.778±0.00 N/A 1.412±0.00 0.164±0.00 N/A 7.145±0.00 0.756±0.00 N/A 2.670±0.00 N/A N/A
ENST00000495533 N/A N/A 0.724±0.00 N/A 3.646±0.00 N/A N/A N/A N/A 1.242±0.00 0.137±0.00 N/A N/A N/A
ENST00000611680 98.531±0.00 244.508±0.00 N/A 55.690±0.00 43.369±33.09 210.727±0.00 14.713±14.43 41.220±41.16 11.454±2.44 102.882±102.22 43.970±43.75 142.027±98.48 153.223±27.96 97.459±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus
GO:0010269 IEA response to selenium ion
GO:0035264 IEA multicellular organism growth
GO:0035934 IEA corticosterone secretion
GO:0042445 IEA hormone metabolic process
GO:0060612 IEA adipose tissue development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000051957 selm selenoprotein M protein_coding Danio_rerio
ENSMUSG00000075702 Selm selenoprotein M protein_coding Mus_musculus

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