C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Scm-like with four mbt domains 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000198879 SFMBT2 9606 - 10:7158624-7411486 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000361972 SFMBT2-001 7158624-7409341 protein_coding
  ENST00000379711 SFMBT2-003 7348142-7408745 protein_coding
  ENST00000379713 SFMBT2-002 7284182-7411486 protein_coding
  ENST00000397167 SFMBT2-201 7158624-7411486 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonHeartKidneyLungOvaryTestisENST00000361972ENST00000379711ENST00000379713ENST00000397167
Transcript ID Adrenal Brain Colon Heart Kidney Lung Ovary Testis
ENST00000361972 0.505±0.00 0.489±0.00 0.174±0.07 0.474±0.00 0.372±0.00 N/A 2.214±0.00 1.011±0.00
ENST00000379711 N/A N/A N/A N/A N/A N/A 1.884±0.00 N/A
ENST00000379713 N/A N/A N/A N/A N/A 0.784±0.00 0.917±0.00 N/A
ENST00000397167 N/A 0.503±0.00 N/A N/A N/A N/A 0.268±0.00 0.273±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005488 IEA binding
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA:IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0010629 IDA negative regulation of gene expression
GO:0042393 IDA histone binding
GO:0043565 IEA sequence-specific DNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045519 sfmbt2 Scm-like with four mbt domains 2 protein_coding Danio_rerio
ENSMUSG00000061186 Sfmbt2 Scm-like with four mbt domains 2 protein_coding Mus_musculus

Loading