C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Scm-like with four mbt domains 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000061186 Sfmbt2 10090 + 2:10370510-10595253 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000041105 Sfmbt2-001 10372450-10595253 protein_coding
  ENSMUST00000114861 Sfmbt2-004 10370511-10439137 protein_coding
  ENSMUST00000114862 Sfmbt2-002 10370510-10439137 protein_coding
  ENSMUST00000114864 Sfmbt2-003 10372436-10439137 protein_coding
  ENSMUST00000116594 Sfmbt2-201 10372436-10595241 protein_coding
  ENSMUST00000126531 Sfmbt2-005 10370518-10404678 processed_transcript
  ENSMUST00000145398 Sfmbt2-006 10372448-10393367 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000041105ENSMUST00000114862ENSMUST00000114864ENSMUST00000116594ENSMUST00000126531ENSMUST00000145398
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000041105 0.077±0.01 0.039±0.01 0.033±0.00 0.137±0.00 0.023±0.01 0.011±0.00 0.026±0.01 0.025±0.01 N/A 0.182±0.13 12.538±5.43 1.959±0.35
ENSMUST00000114862 N/A N/A N/A N/A 0.194±0.00 N/A 0.069±0.00 N/A N/A N/A N/A N/A
ENSMUST00000114864 N/A N/A N/A N/A 0.023±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000116594 N/A 0.039±0.01 0.061±0.00 0.134±0.00 0.011±0.00 0.021±0.01 0.020±0.01 0.041±0.03 0.018±0.01 0.055±0.04 8.087±0.73 1.614±0.21
ENSMUST00000126531 N/A N/A N/A N/A 0.128±0.00 N/A N/A N/A 0.066±0.00 N/A N/A N/A
ENSMUST00000145398 N/A N/A N/A N/A 0.147±0.00 N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000QF CIL_0000QF_0002 CGP 2:10370510-11301226

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0010629 IEA negative regulation of gene expression
GO:0042393 IEA histone binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045519 sfmbt2 Scm-like with four mbt domains 2 protein_coding Danio_rerio
ENSG00000198879 SFMBT2 Scm-like with four mbt domains 2 protein_coding Homo_sapiens

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