C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RNA, U4 small nuclear 40, pseudogene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000201221 RNU4-40P 9606 + 20:35887659-35887801 snRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000364351 RNU4-40P-201 35887659-35887801 snRNA

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonKidneyENST00000364351
Transcript ID Brain Breast Colon Kidney
ENST00000364351 0.186±0.00 21.038±0.00 21.202±0.00 17.018±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000X2 CIL_0000X2_0001 CGP 20:35703609-35950381
CIL_00056T CIL_00056T_0001 CGP 20:35771974-35959472

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000080065 U4 U4 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000080132 U4 U4 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000080305 U4 U4 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000080327 U4 U4 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000080363 U4 U4 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000080503 U4 U4 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000080634 U4 U4 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000080945 U4 U4 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000081131 U4 U4 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000081432 U4 U4 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000081437 U4 U4 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000081552 U4 U4 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000081970 U4 U4 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000082013 U4 U4 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000082424 U4 U4 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000082452 U4 U4 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000082529 U4 U4 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000082576 U4 U4 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000082899 U4 U4 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000082995 U4 U4 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000083128 U4 U4 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000083166 U4 U4 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000083303 U4 U4 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000083509 U4 U4 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000083635 U4 U4 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000084571 U4 U4 spliceosomal RNA snRNA Danio_rerio

Loading