C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: EF-hand calcium binding domain 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000203666 EFCAB2 9606 + 1:244969705-245127164 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000366521 EFCAB2-007 244970356-245087556 protein_coding
  ENST00000366522 EFCAB2-001 244969982-245127164 protein_coding
  ENST00000366523 EFCAB2-003 244969869-245087839 protein_coding
  ENST00000391837 EFCAB2-014 244969705-245091789 processed_transcript
  ENST00000425550 EFCAB2-008 245017242-245086961 protein_coding
  ENST00000427529 EFCAB2-010 245083456-245086961 protein_coding
  ENST00000447569 EFCAB2-012 244970327-245121981 protein_coding
  ENST00000473686 EFCAB2-005 244970351-245087794 processed_transcript
  ENST00000479260 EFCAB2-009 245002153-245030831 processed_transcript
  ENST00000479923 EFCAB2-011 245107179-245122521 processed_transcript
  ENST00000487845 EFCAB2-002 244970390-245122991 processed_transcript
  ENST00000495271 EFCAB2-006 244970423-245087581 processed_transcript
  ENST00000497591 EFCAB2-004 244970286-245091806 processed_transcript
  ENST00000518607 EFCAB2-013 244969739-244970496 retained_intron
  ENST00000549220 EFCAB2-016 244970405-245083831 processed_transcript
  ENST00000551317 EFCAB2-015 245017242-245083860 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000366521ENST00000366522ENST00000366523ENST00000447569ENST00000473686ENST00000479923ENST00000487845ENST00000497591
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000366521 N/A N/A N/A 1.804±0.00 N/A N/A N/A N/A N/A N/A N/A 1.194±0.00 1.399±0.06 12.147±0.00
ENST00000366522 0.262±0.00 0.456±0.00 0.363±0.00 N/A 0.126±0.00 0.255±0.00 0.243±0.00 N/A 0.163±0.00 N/A N/A 0.551±0.33 0.513±0.00 N/A
ENST00000366523 0.895±0.00 1.665±0.00 N/A 2.313±0.00 0.714±0.00 0.697±0.01 1.811±0.00 1.616±0.00 0.496±0.00 1.939±0.00 N/A 1.562±0.73 0.950±0.00 6.163±3.03
ENST00000447569 N/A N/A 2.881±0.00 2.318±0.00 1.085±0.00 1.926±0.00 2.801±0.00 1.130±0.00 2.081±0.00 N/A N/A 9.222±7.65 2.903±0.00 8.285±0.63
ENST00000473686 0.988±0.00 N/A N/A 1.369±0.00 N/A 0.752±0.00 1.704±0.64 N/A 1.317±0.00 N/A 1.911±1.12 N/A N/A 3.134±0.00
ENST00000479923 N/A N/A N/A N/A N/A N/A N/A 0.668±0.00 N/A 2.038±0.00 N/A N/A N/A N/A
ENST00000487845 2.113±0.00 1.301±0.00 N/A 1.802±0.47 4.578±0.00 1.873±0.00 2.004±0.93 2.271±0.00 2.046±0.00 3.453±0.00 2.084±0.00 3.406±2.04 2.674±1.23 N/A
ENST00000497591 N/A N/A N/A N/A N/A 1.179±0.00 N/A 0.433±0.00 N/A 0.983±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000L4 CIL_0000L4_0002 CGP 1:244851166-245127164
CIL_0001DF CIL_0001DF_0002 CGP 1:244969705-245709431

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074323 efcab2 EF-hand calcium binding domain 2 protein_coding Danio_rerio
ENSMUSG00000026495 Efcab2 EF-hand calcium binding domain 2 protein_coding Mus_musculus

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