C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: long intergenic non-protein coding RNA 222
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000203801 LINC00222 9606 + 6:108751654-108769942 lincRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000368974 LINC00222-007 108759165-108769118 lincRNA
  ENST00000416104 LINC00222-003 108751654-108768456 lincRNA
  ENST00000416890 LINC00222-005 108751818-108768456 lincRNA
  ENST00000417773 LINC00222-006 108759161-108769118 lincRNA
  ENST00000430898 LINC00222-001 108759461-108769005 lincRNA
  ENST00000444910 LINC00222-002 108751654-108769118 lincRNA
  ENST00000448744 LINC00222-004 108751656-108769942 lincRNA

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000368974ENST00000416104ENST00000416890ENST00000417773ENST00000430898ENST00000448744
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000368974 N/A 0.078±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000416104 0.021±0.00 0.041±0.00 N/A N/A 0.092±0.00 N/A 0.018±0.00 N/A 0.323±0.00 N/A 0.098±0.00 0.077±0.10 0.115±0.00
ENST00000416890 0.033±0.00 0.048±0.00 0.122±0.00 0.064±0.00 N/A N/A 0.034±0.00 0.469±0.00 0.211±0.00 0.423±0.00 N/A N/A 0.164±0.00
ENST00000417773 N/A N/A N/A N/A N/A 0.164±0.00 N/A N/A N/A N/A N/A N/A 0.060±0.00
ENST00000430898 0.119±0.00 N/A N/A N/A N/A N/A 0.094±0.00 N/A N/A N/A N/A N/A N/A
ENST00000448744 N/A N/A N/A N/A 0.048±0.00 N/A 0.026±0.00 N/A 0.184±0.00 0.114±0.00 N/A 0.071±0.02 0.097±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YH CIL_0008YH_0001 VISTA 6:108288605-108890079

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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