C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Sys1 golgi trafficking protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000204070 SYS1 9606 + 20:45361937-45376798 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000243918 SYS1-001 45363028-45369215 protein_coding
  ENST00000372727 SYS1-005 45361937-45367214 protein_coding
  ENST00000414310 SYS1-002 45361951-45367225 protein_coding
  ENST00000426004 SYS1-006 45363139-45376798 protein_coding
  ENST00000453003 SYS1-003 45363454-45366999 protein_coding
  ENST00000457307 SYS1-007 45363230-45367424 nonsense_mediated_decay
  ENST00000461890 SYS1-009 45363155-45365868 retained_intron
  ENST00000479779 SYS1-008 45365219-45367428 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000243918ENST00000426004ENST00000457307
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000243918 7.874±0.00 10.419±0.00 N/A 6.241±0.00 6.093±3.28 7.028±5.94 9.125±0.00 17.158±0.00 5.139±0.70 N/A 9.543±5.85 7.311±0.00 5.019±0.00
ENST00000426004 N/A N/A 1.529±0.00 N/A N/A 0.927±0.00 N/A N/A N/A 1.206±0.00 N/A N/A N/A
ENST00000457307 N/A N/A N/A N/A N/A N/A N/A N/A 7.400±0.00 N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 IEA Golgi membrane
GO:0015031 IEA protein transport
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000017606 sys1 SYS1 Golgi-localized integral membrane protein homolog (S. cerevisiae) protein_coding Danio_rerio

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