C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Sys1 golgi trafficking protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000243918 SYS1-001 ENSG00000204070 9606 + 20:45363028-45369215 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverOvaryPlacentaTestisENST00000243918
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Ovary Placenta Testis
ENST00000243918 7.874±0.00 10.419±0.00 6.241±0.00 6.093±3.28 7.028±5.94 9.125±0.00 17.158±0.00 5.139±0.70 9.543±5.85 7.311±0.00 5.019±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 IEA Golgi membrane
GO:0015031 IEA protein transport
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000072452 Sys1-201 protein_coding Mus_musculus 0 1044
ENSMUST00000125086 Sys1-004 nonsense_mediated_decay Mus_musculus 0 1044
ENSMUST00000109352 Sys1-001 protein_coding Mus_musculus 0 1044
ENSMUST00000142892 Sys1-007 nonsense_mediated_decay Mus_musculus 0 337
ENSMUST00000138268 Sys1-003 nonsense_mediated_decay Mus_musculus 0 337
ENSMUST00000164863 Gm20458-001 nonsense_mediated_decay Mus_musculus 0 337

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