C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: vitrin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000205221 VIT 9606 + 2:36696690-36814792 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000379241 VIT-007 36696866-36814789 protein_coding
  ENST00000379242 VIT-006 36696690-36814787 protein_coding
  ENST00000389975 VIT-201 36696690-36814792 protein_coding
  ENST00000401530 VIT-004 36696877-36814433 protein_coding
  ENST00000404084 VIT-003 36696826-36814740 protein_coding
  ENST00000457137 VIT-002 36696764-36759675 protein_coding
  ENST00000464309 VIT-008 36773812-36788054 protein_coding
  ENST00000497382 VIT-001 36696805-36814787 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000379241ENST00000379242ENST00000389975ENST00000401530ENST00000404084ENST00000457137ENST00000464309ENST00000497382
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000379241 N/A 0.165±0.00 N/A 0.232±0.00 N/A 1.173±0.00 N/A N/A 1.016±0.00 0.595±0.00 2.070±0.00 0.568±0.23 1.346±0.14
ENST00000379242 2.020±0.00 N/A N/A 2.118±0.00 N/A 1.084±0.85 N/A 2.029±0.00 0.146±0.00 N/A 1.923±1.14 0.559±0.30 2.120±0.00
ENST00000389975 1.550±0.00 N/A N/A N/A 2.530±0.00 0.203±0.00 N/A 0.932±0.00 N/A N/A 1.861±1.58 N/A 1.760±0.00
ENST00000401530 N/A 0.267±0.00 0.059±0.00 N/A 2.392±0.00 0.216±0.00 0.187±0.00 0.723±0.00 0.225±0.00 1.005±0.00 0.058±0.00 0.580±0.13 N/A
ENST00000404084 N/A N/A 0.094±0.00 N/A N/A N/A N/A 0.023±0.00 N/A N/A N/A N/A N/A
ENST00000457137 1.335±0.00 0.208±0.00 0.251±0.07 1.224±0.67 N/A 0.788±0.44 0.053±0.02 1.203±0.00 0.319±0.00 0.820±0.00 N/A 0.475±0.21 N/A
ENST00000464309 N/A N/A N/A N/A N/A N/A 0.113±0.00 N/A N/A N/A N/A N/A N/A
ENST00000497382 N/A N/A 0.116±0.00 1.382±1.20 5.546±0.00 2.995±0.00 N/A N/A N/A 1.613±0.00 3.162±2.56 0.680±0.00 1.248±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000MU CIL_0000MU_0001 CGP 2:36696690-36966472

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005539 IEA glycosaminoglycan binding
GO:0005614 IEA interstitial matrix
GO:0010811 IEA positive regulation of cell-substrate adhesion
GO:0030198 IEA extracellular matrix organization
GO:0031012 IEA extracellular matrix

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000063631 ch1073-291c23.1 ch1073-291c23.1 protein_coding Danio_rerio
ENSMUSG00000024076 Vit vitrin protein_coding Mus_musculus

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