C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000MU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000205221-ENSG00000115808 CGP 9606 2:36696690-36966472
GeneTranscriptPositionBiotype
ENSG00000115808 (STRN)
striatin, calmodulin binding protein 		ENST00000263918 (STRN-001) 36843640-36966472 protein_coding
ENST00000379213 (STRN-201) 36849406-36966471 protein_coding
ENST00000495595 (STRN-002) 36869703-36902928 retained_intron
ENSG00000205221 (VIT)
vitrin 		ENST00000379241 (VIT-007) 36696866-36814789 protein_coding
ENST00000379242 (VIT-006) 36696690-36814787 protein_coding
ENST00000389975 (VIT-201) 36696690-36814792 protein_coding
ENST00000401530 (VIT-004) 36696877-36814433 protein_coding
ENST00000404084 (VIT-003) 36696826-36814740 protein_coding
ENST00000457137 (VIT-002) 36696764-36759675 protein_coding
ENST00000464309 (VIT-008) 36773812-36788054 protein_coding
ENST00000497382 (VIT-001) 36696805-36814787 protein_coding
ENSG00000252756 (RNU6-577P)
RNA, U6 small nuclear 577, pseudogene 		ENST00000516947 (RNU6-577P-201) 36867398-36867495 snRNA
ENSG00000279519 (RP11-288C18.1)
 ENST00000624376 (RP11-288C18.1-001) 36839922-36842539 TEC
CIL_0000MU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024076-ENSMUSG00000024077 CGP 10090 17:78508063-78737196
GeneTranscriptPositionBiotype
ENSMUSG00000024076 (Vit)
vitrin 		ENSMUST00000024880 (Vit-201) 78508063-78627409 protein_coding
ENSMUSG00000024077 (Strn)
striatin, calmodulin binding protein 		ENSMUST00000024881 (Strn-002) 78654596-78688817 protein_coding
ENSMUST00000145480 (Strn-003) 78667196-78684352 protein_coding
ENSMUST00000145910 (Strn-001) 78649913-78737196 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000MU_0001ENSG00000115808ENST00000263918ENST00000379213ENST00000495595ENSG00000205221ENST00000379241ENST00000379242ENST00000389975ENST00000401530ENST00000404084ENST00000457137ENST00000464309ENST00000497382ENSG00000252756ENST00000516947ENSG00000279519ENST00000624376CIL_0000MU_0002ENSMUSG00000024076ENSMUST00000024880ENSMUSG00000024077ENSMUST00000024881ENSMUST00000145480ENSMUST00000145910
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000MU_0001ENSG00000115808ENST00000263918ENST00000379213ENST00000495595ENSG00000205221ENST00000379241ENST00000379242ENST00000389975ENST00000401530ENST00000404084ENST00000457137ENST00000464309ENST00000497382ENSG00000252756ENST00000516947ENSG00000279519ENST00000624376CIL_0000MU_0002ENSMUSG00000024076ENSMUST00000024880ENSMUSG00000024077ENSMUST00000024881ENSMUST00000145480ENSMUST00000145910
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000115808 ENST00000263918 4.741±0.00 1.087±0.00 1.979±0.00 4.639±0.51 3.144±0.21 1.824±0.26 3.811±0.94 N/A N/A 1.699±0.60 0.621±0.00 2.680±1.24 0.864±0.46 1.666±0.46
ENST00000379213 N/A N/A 1.166±0.00 N/A N/A 3.277±0.00 3.225±0.47 N/A N/A 2.037±0.00 1.915±0.00 4.796±0.00 0.858±0.00 1.371±0.00
ENST00000495595 N/A N/A N/A 8.861±0.00 N/A N/A 2.944±0.00 1.670±0.00 N/A N/A N/A N/A N/A 1.604±0.00
ENSG00000205221 ENST00000379241 N/A 0.165±0.00 N/A N/A 0.232±0.00 N/A 1.173±0.00 N/A N/A 1.016±0.00 0.595±0.00 2.070±0.00 0.568±0.23 1.346±0.14
ENST00000379242 2.020±0.00 N/A N/A N/A 2.118±0.00 N/A 1.084±0.85 N/A 2.029±0.00 0.146±0.00 N/A 1.923±1.14 0.559±0.30 2.120±0.00
ENST00000389975 1.550±0.00 N/A N/A N/A N/A 2.530±0.00 0.203±0.00 N/A 0.932±0.00 N/A N/A 1.861±1.58 N/A 1.760±0.00
ENST00000401530 N/A 0.267±0.00 N/A 0.059±0.00 N/A 2.392±0.00 0.216±0.00 0.187±0.00 0.723±0.00 0.225±0.00 1.005±0.00 0.058±0.00 0.580±0.13 N/A
ENST00000404084 N/A N/A N/A 0.094±0.00 N/A N/A N/A N/A 0.023±0.00 N/A N/A N/A N/A N/A
ENST00000457137 1.335±0.00 0.208±0.00 N/A 0.251±0.07 1.224±0.67 N/A 0.788±0.44 0.053±0.02 1.203±0.00 0.319±0.00 0.820±0.00 N/A 0.475±0.21 N/A
ENST00000464309 N/A N/A N/A N/A N/A N/A N/A 0.113±0.00 N/A N/A N/A N/A N/A N/A
ENST00000497382 N/A N/A N/A 0.116±0.00 1.382±1.20 5.546±0.00 2.995±0.00 N/A N/A N/A 1.613±0.00 3.162±2.56 0.680±0.00 1.248±0.00
ENSG00000252756 ENST00000516947 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.202±0.00
ENSG00000279519 ENST00000624376 0.608±0.00 N/A 0.693±0.00 1.090±0.00 0.886±0.00 0.495±0.21 0.458±0.01 0.612±0.17 0.143±0.08 0.525±0.30 0.068±0.00 0.666±0.00 0.203±0.01 0.424±0.04
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024076 ENSMUST00000024880 5.834±3.97 1.063±0.18 0.866±0.10 1.943±1.00 0.866±0.28 0.785±0.14 1.442±0.10 0.325±0.04 0.030±0.01 0.597±0.37 0.724±0.25 4.232±0.70 0.143±0.15 4.545±2.43
ENSMUSG00000024077 ENSMUST00000024881 2.820±0.85 2.198±0.61 N/A N/A 2.644±0.76 3.759±0.37 1.149±0.14 1.505±0.62 1.268±0.00 2.886±0.19 N/A 7.096±1.88 2.258±0.13 2.723±0.34
ENSMUST00000145480 N/A N/A N/A 24.628±0.00 N/A N/A N/A N/A N/A N/A N/A 18.125±0.00 12.169±0.00 2.777±0.00
ENSMUST00000145910 1.438±0.32 3.539±0.64 2.987±0.82 2.689±0.86 1.945±1.04 2.699±0.89 1.928±0.83 1.752±0.62 1.574±0.60 3.076±0.72 0.637±0.17 6.119±0.94 3.840±1.16 1.198±0.53

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