C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nucleosome assembly protein 1-like 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000205531 NAP1L4 9606 - 11:2944431-2992377 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000380542 NAP1L4-001 2944437-2992377 protein_coding
  ENST00000399614 NAP1L4-019 2964725-2992300 protein_coding
  ENST00000430811 NAP1L4-003 2969803-2992102 protein_coding
  ENST00000448187 NAP1L4-004 2958491-2992288 protein_coding
  ENST00000455338 NAP1L4-012 2972149-2989159 protein_coding
  ENST00000469089 NAP1L4-009 2945063-2951295 processed_transcript
  ENST00000469805 NAP1L4-010 2944438-2952769 retained_intron
  ENST00000483643 NAP1L4-006 2954488-2960131 retained_intron
  ENST00000492594 NAP1L4-008 2945331-2955790 retained_intron
  ENST00000492685 NAP1L4-007 2945597-2969904 nonsense_mediated_decay
  ENST00000526023 NAP1L4-022 2945435-2952037 processed_transcript
  ENST00000526115 NAP1L4-002 2945112-2992377 protein_coding
  ENST00000526842 NAP1L4-013 2971464-2992262 protein_coding
  ENST00000528261 NAP1L4-014 2954562-2958934 retained_intron
  ENST00000528363 NAP1L4-021 2954304-2964712 retained_intron
  ENST00000528968 NAP1L4-018 2969916-2992258 protein_coding
  ENST00000529361 NAP1L4-011 2969865-2992258 protein_coding
  ENST00000530064 NAP1L4-015 2971450-2989268 protein_coding
  ENST00000531291 NAP1L4-017 2971529-2992259 protein_coding
  ENST00000532325 NAP1L4-020 2958484-2992300 protein_coding
  ENST00000534372 NAP1L4-016 2972181-2992258 protein_coding
  ENST00000620138 NAP1L4-201 2944431-2992377 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000380542ENST00000399614ENST00000448187ENST00000469805ENST00000483643ENST00000492594ENST00000526115ENST00000532325ENST00000620138
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000380542 5.396±0.00 N/A 2.784±0.00 8.618±1.16 2.853±0.00 7.393±0.00 5.644±2.80 9.562±0.00 3.574±0.87 N/A 7.001±0.00 10.359±2.73 14.046±9.33 36.454±18.42
ENST00000399614 N/A N/A N/A N/A 11.869±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000448187 N/A N/A 4.197±0.00 N/A 6.535±0.00 N/A 4.054±0.00 7.592±0.00 N/A N/A N/A N/A 20.826±0.00 N/A
ENST00000469805 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.376±0.00 N/A N/A N/A N/A
ENST00000483643 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 238.200±0.00 81.935±0.00 235.775±0.00
ENST00000492594 16.328±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 34.924±0.00 N/A
ENST00000526115 N/A N/A 1.924±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532325 N/A N/A 10.375±0.00 N/A 16.710±0.00 28.289±0.00 N/A N/A N/A N/A 13.029±0.00 N/A N/A N/A
ENST00000620138 15.799±0.00 12.983±0.00 N/A 18.629±12.74 30.505±0.00 11.627±5.53 17.058±15.21 27.309±0.00 7.299±3.39 21.766±0.00 53.044±0.00 25.802±0.00 14.560±6.99 44.632±1.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005LX CIL_0005LX_0002 CGP 11:2928273-2992377
CIL_0006OC CIL_0006OC_0002 CGP 11:2944431-3057613

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 TAS cytoplasm
GO:0006334 IEA nucleosome assembly
GO:0044822 IDA poly(A) RNA binding
GO:0051082 TAS unfolded protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000068868 nap1l4b nucleosome assembly protein 1-like 4b protein_coding Danio_rerio
ENSDARG00000070560 nap1l4a nucleosome assembly protein 1-like 4a protein_coding Danio_rerio
ENSMUSG00000059119 Nap1l4 nucleosome assembly protein 1-like 4 protein_coding Mus_musculus

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