C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006OC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000068868-ENSDARG00000036164 CGP 7955 7:33110565-33165554
GeneTranscriptPositionBiotype
ENSDARG00000036164 (cars)
cysteinyl-tRNA synthetase 		ENSDART00000052514 (cars-002) 33130745-33165446 protein_coding
ENSDART00000129720 (cars-001) 33130745-33165554 protein_coding
ENSDARG00000068868 (nap1l4b)
nucleosome assembly protein 1-like 4b 		ENSDART00000099748 (nap1l4b-201) 33110586-33129341 protein_coding
ENSDART00000142385 (nap1l4b-002) 33119166-33128986 protein_coding
ENSDART00000142666 (nap1l4b-001) 33110565-33127058 protein_coding
CIL_0006OC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000205531-ENSG00000110619 CGP 9606 11:2944431-3057613
GeneTranscriptPositionBiotype
ENSG00000110619 (CARS)
cysteinyl-tRNA synthetase 		ENST00000278224 (CARS-002) 3000929-3057418 protein_coding
ENST00000380525 (CARS-004) 3000922-3057437 protein_coding
ENST00000397111 (CARS-001) 3000922-3057613 protein_coding
ENST00000439280 (CARS-007) 3029084-3057429 nonsense_mediated_decay
ENST00000465207 (CARS-009) 3038131-3040088 retained_intron
ENST00000465240 (CARS-010) 3019190-3029057 processed_transcript
ENST00000465331 (CARS-008) 3040524-3057437 processed_transcript
ENST00000466442 (CARS-005) 3000930-3008897 retained_intron
ENST00000470221 (CARS-006) 3000930-3009533 processed_transcript
ENST00000484484 (CARS-011) 3000929-3007010 retained_intron
ENST00000524825 (CARS-015) 3039194-3057441 processed_transcript
ENST00000526890 (CARS-014) 3000930-3057380 retained_intron
ENST00000527330 (CARS-012) 3039215-3057416 nonsense_mediated_decay
ENST00000529772 (CARS-016) 3000930-3057402 protein_coding
ENST00000531387 (CARS-003) 3000922-3057437 nonsense_mediated_decay
ENSG00000183562 (CTC-343N3.1)
 ENST00000332881 (CTC-343N3.1-001) 2989863-2991344 antisense
ENSG00000201616 (RNU1-91P)
RNA, U1 small nuclear 91, pseudogene 		ENST00000364746 (RNU1-91P-201) 3048359-3048521 snRNA
ENSG00000205531 (NAP1L4)
nucleosome assembly protein 1-like 4 		ENST00000380542 (NAP1L4-001) 2944437-2992377 protein_coding
ENST00000399614 (NAP1L4-019) 2964725-2992300 protein_coding
ENST00000430811 (NAP1L4-003) 2969803-2992102 protein_coding
ENST00000448187 (NAP1L4-004) 2958491-2992288 protein_coding
ENST00000455338 (NAP1L4-012) 2972149-2989159 protein_coding
ENST00000469089 (NAP1L4-009) 2945063-2951295 processed_transcript
ENST00000469805 (NAP1L4-010) 2944438-2952769 retained_intron
ENST00000483643 (NAP1L4-006) 2954488-2960131 retained_intron
ENST00000492594 (NAP1L4-008) 2945331-2955790 retained_intron
ENST00000492685 (NAP1L4-007) 2945597-2969904 nonsense_mediated_decay
ENST00000526023 (NAP1L4-022) 2945435-2952037 processed_transcript
ENST00000526115 (NAP1L4-002) 2945112-2992377 protein_coding
ENST00000526842 (NAP1L4-013) 2971464-2992262 protein_coding
ENST00000528261 (NAP1L4-014) 2954562-2958934 retained_intron
ENST00000528363 (NAP1L4-021) 2954304-2964712 retained_intron
ENST00000528968 (NAP1L4-018) 2969916-2992258 protein_coding
ENST00000529361 (NAP1L4-011) 2969865-2992258 protein_coding
ENST00000530064 (NAP1L4-015) 2971450-2989268 protein_coding
ENST00000531291 (NAP1L4-017) 2971529-2992259 protein_coding
ENST00000532325 (NAP1L4-020) 2958484-2992300 protein_coding
ENST00000534372 (NAP1L4-016) 2972181-2992258 protein_coding
ENST00000620138 (NAP1L4-201) 2944431-2992377 protein_coding
ENSG00000207008 (SNORA54)
small nucleolar RNA, H/ACA box 54 		ENST00000384281 (SNORA54-201) 2963771-2963893 snoRNA
CIL_0006OC_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000059119-ENSMUSG00000010755 CGP 10090 7:143513579-143600090
GeneTranscriptPositionBiotype
ENSMUSG00000010755 (Cars)
cysteinyl-tRNA synthetase 		ENSMUST00000010899 (Cars-001) 143557230-143600090 protein_coding
ENSMUST00000105909 (Cars-002) 143557707-143600056 protein_coding
ENSMUST00000134128 (Cars-003) 143587149-143599681 processed_transcript
ENSMUST00000134753 (Cars-007) 143564594-143569122 retained_intron
ENSMUST00000135032 (Cars-008) 143561748-143568356 processed_transcript
ENSMUST00000146462 (Cars-009) 143568933-143570199 processed_transcript
ENSMUST00000146904 (Cars-006) 143570048-143574609 retained_intron
ENSMUST00000151574 (Cars-004) 143592424-143600031 processed_transcript
ENSMUST00000154022 (Cars-005) 143585748-143596752 processed_transcript
ENSMUSG00000059119 (Nap1l4)
nucleosome assembly protein 1-like 4 		ENSMUST00000072727 (Nap1l4-201) 143513579-143549090 protein_coding
ENSMUSG00000065118 (Gm23297)
predicted gene, 23297 		ENSMUST00000083184 (Gm23297-201) 143531394-143531520 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006OC_0001ENSDARG00000036164ENSDART00000052514ENSDART00000129720ENSDARG00000068868ENSDART00000099748ENSDART00000142385ENSDART00000142666CIL_0006OC_0002ENSG00000110619ENST00000278224ENST00000380525ENST00000397111ENST00000439280ENST00000465207ENST00000465240ENST00000465331ENST00000466442ENST00000470221ENST00000484484ENST00000524825ENST00000526890ENST00000527330ENST00000529772ENST00000531387ENSG00000183562ENST00000332881ENSG00000201616ENST00000364746ENSG00000205531ENST00000380542ENST00000399614ENST00000430811ENST00000448187ENST00000455338ENST00000469089ENST00000469805ENST00000483643ENST00000492594ENST00000492685ENST00000526023ENST00000526115ENST00000526842ENST00000528261ENST00000528363ENST00000528968ENST00000529361ENST00000530064ENST00000531291ENST00000532325ENST00000534372ENST00000620138ENSG00000207008ENST00000384281CIL_0006OC_0003ENSMUSG00000010755ENSMUST00000010899ENSMUST00000105909ENSMUST00000134128ENSMUST00000134753ENSMUST00000135032ENSMUST00000146462ENSMUST00000146904ENSMUST00000151574ENSMUST00000154022ENSMUSG00000059119ENSMUST00000072727ENSMUSG00000065118ENSMUST00000083184
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006OC_0001ENSDARG00000036164ENSDART00000052514ENSDART00000129720ENSDARG00000068868ENSDART00000099748ENSDART00000142666CIL_0006OC_0002ENSG00000110619ENST00000278224ENST00000380525ENST00000397111ENST00000466442ENST00000484484ENST00000526890ENST00000529772ENST00000531387ENSG00000183562ENST00000332881ENSG00000201616ENST00000364746ENSG00000205531ENST00000380542ENST00000399614ENST00000448187ENST00000469805ENST00000483643ENST00000492594ENST00000526115ENST00000532325ENST00000620138ENSG00000207008ENST00000384281CIL_0006OC_0003ENSMUSG00000010755ENSMUST00000010899ENSMUST00000105909ENSMUST00000135032ENSMUST00000146462ENSMUST00000146904ENSMUST00000151574ENSMUSG00000059119ENSMUST00000072727ENSMUSG00000065118ENSMUST00000083184
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000036164 ENSDART00000052514 N/A N/A N/A 2.553±0.21 N/A N/A 7.710±5.25 9.100±0.01 0.370±0.00 N/A 0.947±0.00 N/A N/A N/A
ENSDART00000129720 N/A N/A N/A 5.040±2.59 N/A N/A 3.132±0.81 6.920±0.00 1.545±0.00 N/A 1.142±0.00 N/A N/A N/A
ENSDARG00000068868 ENSDART00000099748 N/A N/A N/A 10.318±0.00 N/A N/A 9.459±0.00 2.339±0.00 0.263±0.00 N/A 2.457±0.00 N/A N/A N/A
ENSDART00000142385 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000142666 N/A N/A N/A 12.745±7.06 N/A N/A 19.421±5.02 16.197±3.06 0.129±0.00 N/A 3.099±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000110619 ENST00000278224 8.418±0.00 15.045±0.00 N/A 8.123±5.66 13.299±0.00 2.127±0.48 1.399±0.81 6.647±0.00 2.490±1.66 4.840±3.46 16.785±0.00 10.501±5.92 8.053±0.70 6.196±1.77
ENST00000380525 2.853±0.00 N/A N/A N/A N/A 4.364±0.00 1.442±0.00 N/A N/A 4.490±0.00 6.214±0.00 1.397±0.00 3.562±0.00 3.585±0.49
ENST00000397111 N/A N/A N/A 2.310±0.00 7.267±0.00 3.450±0.00 N/A 2.567±0.29 3.873±0.00 2.668±0.00 6.683±6.16 9.346±5.62 6.715±1.71 7.633±1.83
ENST00000439280 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465207 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465240 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465331 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466442 N/A N/A N/A N/A 0.911±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470221 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484484 N/A 10.151±0.00 N/A 8.850±0.00 N/A N/A N/A 4.776±0.00 3.501±0.00 5.084±0.00 N/A 8.074±2.97 N/A 6.036±0.00
ENST00000524825 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526890 N/A 2.008±0.00 N/A 2.277±0.00 N/A N/A 0.344±0.00 N/A N/A N/A N/A N/A N/A 2.312±0.00
ENST00000527330 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529772 N/A N/A N/A N/A N/A N/A N/A N/A 0.661±0.00 N/A N/A N/A N/A N/A
ENST00000531387 N/A N/A N/A N/A 0.743±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000183562 ENST00000332881 N/A N/A 3.422±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000201616 ENST00000364746 0.219±0.00 0.115±0.00 N/A 0.243±0.00 N/A N/A 5.728±0.00 N/A N/A N/A N/A 0.507±0.00 N/A 0.453±0.00
ENSG00000205531 ENST00000380542 5.396±0.00 N/A 2.784±0.00 8.618±1.16 2.853±0.00 7.393±0.00 5.644±2.80 9.562±0.00 3.574±0.87 N/A 7.001±0.00 10.359±2.73 14.046±9.33 36.454±18.42
ENST00000399614 N/A N/A N/A N/A 11.869±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000430811 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000448187 N/A N/A 4.197±0.00 N/A 6.535±0.00 N/A 4.054±0.00 7.592±0.00 N/A N/A N/A N/A 20.826±0.00 N/A
ENST00000455338 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469089 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469805 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.376±0.00 N/A N/A N/A N/A
ENST00000483643 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 238.200±0.00 81.935±0.00 235.775±0.00
ENST00000492594 16.328±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 34.924±0.00 N/A
ENST00000492685 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526023 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526115 N/A N/A 1.924±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526842 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528261 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528363 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528968 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529361 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530064 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531291 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532325 N/A N/A 10.375±0.00 N/A 16.710±0.00 28.289±0.00 N/A N/A N/A N/A 13.029±0.00 N/A N/A N/A
ENST00000534372 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000620138 15.799±0.00 12.983±0.00 N/A 18.629±12.74 30.505±0.00 11.627±5.53 17.058±15.21 27.309±0.00 7.299±3.39 21.766±0.00 53.044±0.00 25.802±0.00 14.560±6.99 44.632±1.10
ENSG00000207008 ENST00000384281 0.212±0.00 N/A N/A 46.106±0.00 10.480±10.03 N/A 94.992±0.00 N/A 44.726±0.00 219.847±0.00 26.788±0.00 1.816±0.00 N/A 0.883±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000010755 ENSMUST00000010899 1.793±0.31 1.817±0.75 1.297±0.07 2.774±0.27 1.515±0.46 1.855±0.77 0.939±0.25 0.792±0.15 2.323±0.46 1.739±0.33 1.838±0.24 3.358±0.95 1.455±0.12 2.856±0.90
ENSMUST00000105909 6.312±0.75 4.103±0.48 7.843±0.55 10.463±2.60 4.229±0.99 5.896±0.91 2.399±0.45 3.226±0.52 11.386±5.61 4.539±1.17 10.120±0.40 8.190±2.81 17.200±5.18 6.327±5.60
ENSMUST00000134128 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134753 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135032 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 59.588±0.00
ENSMUST00000146462 N/A N/A N/A 26.596±0.00 N/A N/A N/A N/A N/A N/A N/A 22.857±0.00 44.660±9.05 N/A
ENSMUST00000146904 3.508±0.00 3.037±0.00 N/A N/A 3.672±0.36 N/A 1.871±0.00 N/A N/A 3.468±0.00 N/A 5.279±0.63 N/A N/A
ENSMUST00000151574 N/A 9.481±2.30 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154022 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000059119 ENSMUST00000072727 24.289±2.64 23.535±14.64 32.705±2.49 56.470±32.34 21.289±8.27 12.168±2.19 33.985±3.83 18.537±7.76 18.581±14.64 20.030±4.92 31.867±13.84 30.970±16.72 32.818±12.80 18.453±5.60
ENSMUSG00000065118 ENSMUST00000083184 600.891±0.00 N/A N/A 10.106±0.00 N/A 1239.890±0.00 N/A N/A N/A N/A 8.530±0.00 14.440±4.51 17.045±0.00 N/A

Loading