C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: NYN domain and retroviral integrase containing
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000205978 NYNRIN 9606 + 14:24398786-24419288 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000382554 NYNRIN-001 24398786-24419288 protein_coding
  ENST00000554505 NYNRIN-003 24412594-24414718 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000382554
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000382554 3.756±0.00 1.013±0.00 0.361±0.06 2.089±1.66 1.424±0.00 0.797±0.58 1.733±0.77 1.050±0.55 2.107±0.55 0.393±0.13 9.284±9.40 5.805±0.07 2.339±1.68

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005E9 CIL_0005E9_0001 CGP 14:24365673-24419288
CIL_0004O9 CIL_0004O9_0001 CGP 14:24398786-24430954

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0015074 IEA DNA integration
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000075592 Nynrin NYN domain and retroviral integrase containing protein_coding Mus_musculus

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