C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0004O9_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000205978-ENSG00000139899 CGP 9606 14:24398786-24430954
GeneTranscriptPositionBiotype
ENSG00000100441 (KHNYN)
KH and NYN domain containing
ENST00000251343 (KHNYN-002) 24429286-24441834 protein_coding
ENST00000553935 (KHNYN-001) 24429938-24438408 protein_coding
ENST00000554268 (KHNYN-005) 24432794-24437425 protein_coding
ENST00000556255 (KHNYN-006) 24435457-24438408 retained_intron
ENST00000556510 (KHNYN-004) 24430224-24431665 protein_coding
ENST00000556842 (KHNYN-003) 24429935-24437617 protein_coding
ENSG00000205978 (NYNRIN)
NYN domain and retroviral integrase containing
ENST00000382554 (NYNRIN-001) 24398786-24419288 protein_coding
ENST00000554505 (NYNRIN-003) 24412594-24414718 processed_transcript
CIL_0004O9_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000075592-ENSMUSG00000040380 CGP 10090 14:55854036-55884256
GeneTranscriptPositionBiotype
ENSMUSG00000040380 (Cbln3)
cerebellin 3 precursor protein
ENSMUST00000063871 (Cbln3-201) 55878920-55884256 protein_coding
ENSMUST00000172378 (Cbln3-202) 55882061-55884232 protein_coding
ENSMUSG00000075592 (Nynrin)
NYN domain and retroviral integrase containing
ENSMUST00000100529 (Nynrin-201) 55854036-55874291 protein_coding
ENSMUST00000168479 (Nynrin-202) 55854115-55874735 protein_coding
ENSMUSG00000097542 (Gm26751)
predicted gene, 26751
ENSMUST00000181218 (Gm26751-201) 55864311-55874735 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004O9_0001ENSG00000100441ENST00000251343ENST00000553935ENST00000554268ENST00000556255ENST00000556510ENST00000556842ENSG00000205978ENST00000382554ENST00000554505CIL_0004O9_0002ENSMUSG00000040380ENSMUST00000063871ENSMUST00000172378ENSMUSG00000075592ENSMUST00000100529ENSMUST00000168479ENSMUSG00000097542ENSMUST00000181218
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004O9_0001ENSG00000100441ENST00000251343ENST00000553935ENST00000556255ENSG00000205978ENST00000382554CIL_0004O9_0002ENSMUSG00000040380ENSMUST00000063871ENSMUST00000172378ENSMUSG00000075592ENSMUST00000100529ENSMUSG00000097542ENSMUST00000181218
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100441 ENST00000251343 N/A N/A N/A N/A N/A 3.818±0.00 N/A 2.093±0.00 N/A 3.141±0.00 N/A 10.653±0.00 N/A N/A
ENST00000553935 8.113±0.00 N/A N/A 4.643±0.00 3.804±1.82 5.892±0.00 2.636±2.22 3.705±2.21 2.295±0.49 6.128±4.48 6.593±0.00 1.923±0.00 N/A 5.240±0.00
ENST00000554268 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556255 N/A N/A N/A 0.931±0.00 N/A N/A N/A N/A N/A N/A N/A 20.024±0.00 N/A 3.719±0.00
ENST00000556510 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556842 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000205978 ENST00000382554 3.756±0.00 N/A 1.013±0.00 0.361±0.06 2.089±1.66 1.424±0.00 0.797±0.58 1.733±0.77 1.050±0.55 2.107±0.55 0.393±0.13 9.284±9.40 5.805±0.07 2.339±1.68
ENST00000554505 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000040380 ENSMUST00000063871 0.069±0.03 0.045±0.02 0.089±0.02 0.127±0.05 0.069±0.04 0.496±0.19 0.025±0.01 0.044±0.02 0.144±0.07 0.057±0.02 0.017±0.01 0.110±0.04 0.232±0.12 0.098±0.02
ENSMUST00000172378 0.058±0.00 0.105±0.05 0.130±0.00 N/A 0.114±0.03 1.112±0.33 0.019±0.01 0.010±0.00 0.269±0.13 0.134±0.07 0.024±0.01 0.243±0.10 0.420±0.34 0.212±0.01
ENSMUSG00000075592 ENSMUST00000100529 1.490±0.98 0.621±0.07 1.257±0.00 1.637±0.51 0.611±0.10 0.461±0.13 0.297±0.04 0.596±0.05 0.218±0.18 1.264±0.09 0.147±0.05 1.855±0.76 2.053±0.32 0.063±0.02
ENSMUST00000168479 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000097542 ENSMUST00000181218 8.448±4.76 4.523±0.34 5.083±0.92 6.572±3.72 4.456±0.24 3.393±0.55 1.954±0.28 4.438±0.35 1.255±0.85 5.863±2.21 0.358±0.06 11.523±2.86 5.667±2.86 0.232±0.11

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