C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000206561 COLQ 9606 - 3:15450133-15521751 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000383781 COLQ-003 15450483-15498872 protein_coding
  ENST00000383786 COLQ-007 15451539-15521736 protein_coding
  ENST00000383788 COLQ-001 15450133-15521751 protein_coding
  ENST00000603469 COLQ-005 15478590-15479374 processed_transcript
  ENST00000603752 COLQ-008 15450166-15450879 processed_transcript
  ENST00000603808 COLQ-002 15451473-15521751 protein_coding
  ENST00000604401 COLQ-006 15475228-15477586 retained_intron
  ENST00000605797 COLQ-004 15466402-15498548 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalHeartMuscleOvaryENST00000383788
Transcript ID Adrenal Heart Muscle Ovary
ENST00000383788 7.875±0.00 2.893±0.00 2.358±0.00 4.719±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005AK CIL_0005AK_0001 CGP 3:15381275-15450635
CIL_0005AJ CIL_0005AJ_0001 CGP 3:15427355-15521751
CIL_0005AM CIL_0005AM_0001 CGP 3:15450133-15601831

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001507 TAS acetylcholine catabolic process in synaptic cleft
GO:0005515 IPI protein binding
GO:0005581 IEA collagen trimer
GO:0005605 TAS basal lamina
GO:0005615 TAS extracellular space
GO:0008105 TAS asymmetric protein localization
GO:0030054 IEA cell junction
GO:0045202 IEA synapse

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000019692 colq collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase protein_coding Danio_rerio
ENSDARG00000074216 COLQ collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase protein_coding Danio_rerio
ENSMUSG00000057606 Colq collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase protein_coding Mus_musculus

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