C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000057606 Colq 10090 - 14:31523082-31591343 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000112027 Colq-001 31523082-31577383 protein_coding
  ENSMUST00000124014 Colq-003 31552909-31591343 protein_coding
  ENSMUST00000129238 Colq-005 31586773-31591308 processed_transcript
  ENSMUST00000146302 Colq-004 31578383-31591319 processed_transcript
  ENSMUST00000150054 Colq-002 31523160-31558140 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonHeartLungMusclePlacentaENSMUST00000112027ENSMUST00000150054
Transcript ID Breast Colon Heart Lung Muscle Placenta
ENSMUST00000112027 5.337±0.58 1.568±0.17 4.341±1.15 8.181±2.29 3.094±0.47 2.077±1.02
ENSMUST00000150054 N/A N/A N/A 17.516±0.36 1.859±0.40 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WP CIL_0007WP_0002 VISTA 14:30932335-31535522
CIL_0005AJ CIL_0005AJ_0002 CGP 14:31495079-31591343
CIL_0005AM CIL_0005AM_0002 CGP 14:31523082-31641286

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005581 IEA collagen trimer
GO:0030054 IEA cell junction
GO:0042135 IEA neurotransmitter catabolic process
GO:0045202 IEA synapse

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000019692 colq collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase protein_coding Danio_rerio
ENSDARG00000074216 COLQ collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase protein_coding Danio_rerio
ENSG00000206561 COLQ collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase protein_coding Homo_sapiens

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