C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: T cell receptor beta variable 25-1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000211751 TRBV25-1 9606 + 7:142670740-142793141 TR_V_gene
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000390398 TRBV25-1-001 142670740-142671244 TR_V_gene
  ENST00000612107 TRBV25-1-201 142670777-142793141 TR_V_gene
  ENST00000617717 TRBV25-1-202 142670777-142793141 TR_V_gene

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartMuscleOvaryENST00000612107
Transcript ID Heart Muscle Ovary
ENST00000612107 0.144±0.00 0.053±0.00 1.333±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005886 TAS plasma membrane
GO:0006955 NAS immune response
GO:0016020 NAS membrane
GO:0016021 IEA integral component of membrane
GO:0031295 TAS T cell costimulation
GO:0050776 TAS regulation of immune response
GO:0050852 TAS T cell receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000091233 TRBV28 T cell receptor beta variable 28 protein_coding Danio_rerio
ENSMUSG00000076490 Trbc1 T cell receptor beta, constant region 1 IG_C_gene Mus_musculus
ENSMUSG00000076498 Trbc2 T cell receptor beta, constant 2 IG_C_gene Mus_musculus

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