C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: T cell receptor beta variable 25-1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000612107 TRBV25-1-201 ENSG00000211751 9606 + 7:142670777-142793141 TR_V_gene

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartMuscleOvaryENST00000612107
Transcript ID Heart Muscle Ovary
ENST00000612107 0.144±0.00 0.053±0.00 1.333±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005886 TAS plasma membrane
GO:0006955 NAS immune response
GO:0016020 NAS membrane
GO:0016021 IEA integral component of membrane
GO:0031295 TAS T cell costimulation
GO:0050776 TAS regulation of immune response
GO:0050852 TAS T cell receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000103291 Trbc1-201 IG_C_gene Mus_musculus 0 438
ENSMUST00000103299 Trbc2-201 IG_C_gene Mus_musculus 0 427

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