C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: T cell receptor alpha variable 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000211779 TRAV5 9606 + 14:21749178-21749705 TR_V_gene
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000390427 TRAV5-001 21749178-21749705 TR_V_gene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonLiverLungOvaryTestisENST00000390427
Transcript ID Adrenal Breast Colon Liver Lung Ovary Testis
ENST00000390427 0.281±0.00 0.264±0.00 0.326±0.00 0.651±0.00 0.413±0.00 0.536±0.00 0.067±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008CX CIL_0008CX_0001 VISTA 14:21403052-22005074

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000076858 Trav3-4 T cell receptor alpha variable 3-4 TR_V_gene Mus_musculus
ENSMUSG00000094828 Trav3-3 T cell receptor alpha variable 3-3 TR_V_gene Mus_musculus

Loading