C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: T cell receptor alpha variable 18
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000211798 TRAV18 9606 + 14:22003106-22003673 TR_V_gene
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000390446 TRAV18-001 22003106-22003673 TR_V_gene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonHeartPlacentaTestisENST00000390446
Transcript ID Adrenal Colon Heart Placenta Testis
ENST00000390446 0.035±0.00 0.131±0.00 0.032±0.00 0.145±0.00 0.159±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008CX CIL_0008CX_0001 VISTA 14:21403052-22005074

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000095689 Trav12d-1 T cell receptor alpha variable 12D-1 TR_V_gene Mus_musculus
ENSMUSG00000095958 Trav12-3 T cell receptor alpha variable 12-3 TR_V_gene Mus_musculus
ENSMUSG00000096656 Trav12-2 T cell receptor alpha variable 12-2 TR_V_gene Mus_musculus

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