C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RNA, U6 small nuclear 510, pseudogene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000212541 RNU6-510P 9606 + 1:37991462-37991569 snRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000391239 RNU6-510P-201 37991462-37991569 snRNA

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainHeartLiverOvaryTestisENST00000391239
Transcript ID Adrenal Brain Heart Liver Ovary Testis
ENST00000391239 1.572±0.00 0.391±0.00 0.901±0.00 0.519±0.00 1.288±0.74 0.345±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00095Y CIL_00095Y_0001 VISTA 1:37729017-38330016
CIL_0007UI CIL_0007UI_0001 VISTA 1:37794522-38395934
CIL_0008NZ CIL_0008NZ_0001 VISTA 1:37861857-38463593
CIL_0008EP CIL_0008EP_0001 VISTA 1:37891108-38491954
CIL_000892 CIL_000892_0001 VISTA 1:37897137-38498368
CIL_0007QI CIL_0007QI_0001 VISTA 1:37946403-38547845
CIL_0008ZP CIL_0008ZP_0001 VISTA 1:37962513-38566844
CIL_0007QK CIL_0007QK_0001 VISTA 1:37970270-38571704

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000083098 U6 U6 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000083788 U6 U6 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000083862 U6 U6 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000083908 U6 U6 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000084067 U6 U6 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000084260 U6 U6 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000084404 U6 U6 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000085057 U6 U6 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000085268 U6 U6 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000085387 U6 U6 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000085394 U6 U6 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000085424 U6 U6 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000085692 U6 U6 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000085883 U6 U6 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000086491 U6 U6 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000086629 U6 U6 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000086755 U6 U6 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000086891 U6 U6 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000087242 U6 U6 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000087547 U6 U6 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000088871 U6 U6 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000089712 U6 U6 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000089792 U6 U6 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000089851 U6 U6 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000090362 U6 U6 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000090500 U6 U6 spliceosomal RNA snRNA Danio_rerio
ENSDARG00000091802 U6 U6 spliceosomal RNA snRNA Danio_rerio

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