C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger protein 580
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000213015 ZNF580 9606 + 19:55635016-55643469 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000325333 ZNF580-001 55640896-55643469 protein_coding
  ENST00000543039 ZNF580-002 55641763-55643469 protein_coding
  ENST00000545125 ZNF580-201 55642097-55643469 protein_coding
  ENST00000590190 ZNF580-005 55640985-55642574 protein_coding
  ENST00000592461 ZNF580-003 55642097-55642821 protein_coding
  ENST00000592881 ZNF580-004 55635016-55642818 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000325333ENST00000543039ENST00000545125
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000325333 10.896±0.00 N/A N/A 12.764±0.00 14.395±0.00 21.720±0.00 11.183±0.00 22.021±0.00 5.309±0.00 45.600±0.00 12.729±0.00 N/A 11.223±3.00 N/A
ENST00000543039 4.460±0.00 15.329±0.00 0.330±0.00 N/A 5.154±0.00 N/A N/A 7.291±0.00 0.527±0.00 0.178±0.00 0.801±0.00 6.883±3.46 N/A 3.280±0.00
ENST00000545125 N/A N/A N/A N/A N/A 1.601±0.00 N/A N/A N/A N/A N/A 23.351±3.17 11.153±1.41 22.820±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003SV CIL_0003SV_0001 CGP 19:55620742-55643469

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001938 IDA positive regulation of endothelial cell proliferation
GO:0002690 IDA positive regulation of leukocyte chemotaxis
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006935 IEA chemotaxis
GO:0006954 IEA inflammatory response
GO:0010595 IDA positive regulation of endothelial cell migration
GO:0010628 IDA positive regulation of gene expression
GO:0032757 IDA positive regulation of interleukin-8 production
GO:0046872 IEA metal ion binding
GO:0070301 IDA cellular response to hydrogen peroxide

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000055633 Zfp580 zinc finger protein 580 protein_coding Mus_musculus

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