C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 580
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000543039 ZNF580-002 ENSG00000213015 9606 + 19:55641763-55643469 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastKidneyLiverLungMuscleOvaryTestisENST00000543039
Transcript ID Adipose Adrenal Bladder Breast Kidney Liver Lung Muscle Ovary Testis
ENST00000543039 4.460±0.00 15.329±0.00 0.330±0.00 5.154±0.00 7.291±0.00 0.527±0.00 0.178±0.00 0.801±0.00 6.883±3.46 3.280±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003SV CIL_0003SV_0001 CGP 19:55620742-55643469

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001938 IDA positive regulation of endothelial cell proliferation
GO:0002690 IDA positive regulation of leukocyte chemotaxis
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006935 IEA chemotaxis
GO:0006954 IEA inflammatory response
GO:0010595 IDA positive regulation of endothelial cell migration
GO:0010628 IDA positive regulation of gene expression
GO:0032757 IDA positive regulation of interleukin-8 production
GO:0046872 IEA metal ion binding
GO:0070301 IDA cellular response to hydrogen peroxide

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000069324 Zfp580-201 protein_coding Mus_musculus 0 833

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