C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ZNF625-ZNF20 readthrough (NMD candidate)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000213297 ZNF625-ZNF20 9606 - 19:12132117-12156731 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000430024 ZNF625-ZNF20-001 12132117-12156731 nonsense_mediated_decay
  ENST00000434822 ZNF625-ZNF20-002 12140217-12156731 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000430024
Transcript ID Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000430024 0.575±0.22 1.321±0.00 1.137±0.00 0.458±0.00 2.501±0.00 0.480±0.18 1.259±0.00 0.787±0.41 0.674±0.12 3.631±0.84

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005622 IEA intracellular
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000063364 3300002I08Rik RIKEN cDNA 3300002I08 gene protein_coding Mus_musculus
ENSMUSG00000072066 6720489N17Rik RIKEN cDNA 6720489N17 gene protein_coding Mus_musculus
ENSMUSG00000073158 9030624G23Rik RIKEN cDNA 9030624G23 gene protein_coding Mus_musculus
ENSMUSG00000074832 2410141K09Rik RIKEN cDNA 2410141K09 gene protein_coding Mus_musculus
ENSMUSG00000095315 Gm10130 predicted gene 10130 protein_coding Mus_musculus

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