C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 3300002I08 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000063364 3300002I08Rik 10090 - 2:150310935-150362765 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000051153 3300002I08Rik-001 150310935-150362765 protein_coding
  ENSMUST00000124945 3300002I08Rik-004 150310937-150362733 processed_transcript
  ENSMUST00000138130 3300002I08Rik-002 150343244-150362744 processed_transcript
  ENSMUST00000152036 3300002I08Rik-003 150342836-150362742 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000051153ENSMUST00000124945ENSMUST00000138130ENSMUST00000152036
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000051153 0.258±0.01 0.774±0.00 0.484±0.21 0.607±0.16 0.770±0.41 0.280±0.00 0.129±0.00 0.542±0.16 0.227±0.00 0.208±0.05 0.136±0.02 0.741±0.28 0.202±0.00 0.262±0.13
ENSMUST00000124945 0.440±0.18 0.904±0.10 0.678±0.00 0.512±0.00 0.388±0.13 0.314±0.16 0.115±0.00 0.506±0.00 0.256±0.10 0.397±0.18 0.140±0.00 0.368±0.17 0.536±0.01 0.579±0.11
ENSMUST00000138130 0.116±0.04 N/A 0.251±0.01 0.387±0.21 0.182±0.08 0.604±0.12 0.144±0.06 0.049±0.00 0.069±0.03 0.399±0.09 0.034±0.01 0.257±0.09 0.150±0.12 0.082±0.02
ENSMUST00000152036 0.442±0.21 0.410±0.32 0.557±0.07 0.528±0.14 0.255±0.16 0.185±0.00 0.236±0.11 0.234±0.06 0.205±0.13 0.112±0.02 0.135±0.03 0.840±0.70 0.760±0.67 0.161±0.07

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0005575 ND cellular_component
GO:0005622 IEA intracellular
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000213297 ZNF625-ZNF20 ZNF625-ZNF20 readthrough (NMD candidate) protein_coding Homo_sapiens

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