C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: melanoma antigen family A, 12
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000213401 MAGEA12 9606 + X:152733779-152737669 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000357916 MAGEA12-001 152733779-152737669 protein_coding
  ENST00000393869 MAGEA12-201 152733779-152737660 protein_coding
  ENST00000393900 MAGEA12-202 152733862-152737660 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainPlacentaTestisENST00000357916ENST00000393869
Transcript ID Adrenal Brain Placenta Testis
ENST00000357916 0.054±0.00 0.202±0.00 0.030±0.00 1.790±0.49
ENST00000393869 N/A N/A N/A 0.786±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001AT CIL_0001AT_0002 CGP X:152733779-152753884

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058212 ndnl2 necdin-like 2 protein_coding Danio_rerio
ENSMUSG00000031118 1700080O16Rik RIKEN cDNA 1700080O16 gene protein_coding Mus_musculus
ENSMUSG00000031179 3830417A13Rik RIKEN cDNA 3830417A13 gene protein_coding Mus_musculus
ENSMUSG00000033343 Magea4 melanoma antigen, family A, 4 protein_coding Mus_musculus
ENSMUSG00000043453 Magea10 melanoma antigen family A, 10 protein_coding Mus_musculus
ENSMUSG00000055746 Magea2 melanoma antigen, family A, 2 protein_coding Mus_musculus
ENSMUSG00000063728 Magea6 melanoma antigen, family A, 6 protein_coding Mus_musculus
ENSMUSG00000079349 Magea5 melanoma antigen, family A, 5 protein_coding Mus_musculus
ENSMUSG00000079350 Magea8 melanoma antigen, family A, 8 protein_coding Mus_musculus
ENSMUSG00000094196 Magea3 melanoma antigen, family A, 3 protein_coding Mus_musculus
ENSMUSG00000096644 Magea1 melanoma antigen, family A, 1 protein_coding Mus_musculus

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