C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chloride intracellular channel 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000213719 CLIC1 9606 - 6:31730581-31739763 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000375779 CLIC1-004 31730581-31736572 protein_coding
  ENST00000375780 CLIC1-002 31730581-31737318 protein_coding
  ENST00000375784 CLIC1-001 31730581-31736567 protein_coding
  ENST00000395892 CLIC1-003 31730581-31739763 protein_coding
  ENST00000616760 CLIC1-202 31730583-31736545 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000375779ENST00000375784ENST00000616760
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000375779 104.779±0.00 90.543±0.00 6.498±0.00 20.023±0.00 93.938±0.00 105.310±0.00 45.070±0.00 77.700±69.53 18.523±0.00 139.111±127.95 17.162±0.00 119.929±74.46 262.239±165.70 35.492±29.45
ENST00000375784 68.860±0.00 35.704±0.00 8.640±0.00 6.000±4.27 52.185±10.65 68.849±9.02 11.812±0.19 56.940±0.00 20.034±14.58 66.075±30.92 6.135±2.93 117.605±43.42 108.096±14.46 18.172±11.56
ENST00000616760 N/A 60.504±0.00 N/A 3.511±0.00 N/A N/A N/A 43.092±32.06 19.220±0.00 114.717±0.00 N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005247 IEA voltage-gated chloride channel activity
GO:0005254 IDA chloride channel activity
GO:0005515 IPI protein binding
GO:0005615 IDA extracellular space
GO:0005634 TAS nucleus
GO:0005635 IDA nuclear envelope
GO:0005737 IDA cytoplasm
GO:0005739 IEA mitochondrion
GO:0005886 IEA plasma membrane
GO:0005903 TAS brush border
GO:0006821 IDA chloride transport
GO:0007165 TAS signal transduction
GO:0016020 IDA membrane
GO:0031982 IDA vesicle
GO:0034707 IEA chloride channel complex
GO:0034765 IEA regulation of ion transmembrane transport
GO:0044070 IEA regulation of anion transport
GO:0045669 IEA positive regulation of osteoblast differentiation
GO:0048471 IDA perinuclear region of cytoplasm
GO:0051881 IEA regulation of mitochondrial membrane potential
GO:0070062 IDA extracellular vesicular exosome
GO:0070527 IMP platelet aggregation
GO:0072562 IDA blood microparticle
GO:1902476 IEA chloride transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058858 clic1 chloride intracellular channel 1 protein_coding Danio_rerio
ENSMUSG00000007041 Clic1 chloride intracellular channel 1 protein_coding Mus_musculus

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