C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chloride intracellular channel 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000007041 Clic1 10090 + 17:35049966-35058749 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000007257 Clic1-001 35049966-35058749 protein_coding
  ENSMUST00000172599 Clic1-002 35052450-35055741 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000007257ENSMUST00000172599
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000007257 50.216±14.59 18.339±5.18 79.410±14.47 20.809±12.66 47.157±5.71 72.930±28.71 19.122±0.82 29.854±14.10 36.455±33.01 59.258±17.34 5.505±2.06 65.187±21.24 105.043±33.38 5.999±2.30
ENSMUST00000172599 N/A 9.370±0.30 N/A 3.433±0.00 N/A N/A N/A N/A N/A N/A 1.555±0.57 52.826±0.00 75.907±0.00 3.961±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005247 IEA voltage-gated chloride channel activity
GO:0005254 IEA chloride channel activity
GO:0005515 IEA protein binding
GO:0005615 IEA extracellular space
GO:0005634 IDA nucleus
GO:0005635 IEA nuclear envelope
GO:0005737 ISS cytoplasm
GO:0005739 IDA mitochondrion
GO:0005886 IEA plasma membrane
GO:0006821 IEA chloride transport
GO:0016020 IEA membrane
GO:0031982 IEA vesicle
GO:0034707 IEA chloride channel complex
GO:0034765 IEA regulation of ion transmembrane transport
GO:0044070 IEA regulation of anion transport
GO:0045669 IDA positive regulation of osteoblast differentiation
GO:0048471 IEA perinuclear region of cytoplasm
GO:0051881 IDA regulation of mitochondrial membrane potential
GO:0070062 IEA extracellular vesicular exosome
GO:0070527 IEA platelet aggregation
GO:0072562 IEA blood microparticle
GO:1902476 IEA chloride transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058858 clic1 chloride intracellular channel 1 protein_coding Danio_rerio
ENSG00000213719 CLIC1 chloride intracellular channel 1 protein_coding Homo_sapiens

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