C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: galactose-1-phosphate uridylyltransferase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000213930 GALT 9606 + 9:34638133-34651035 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000378842 GALT-002 34646663-34651035 protein_coding
  ENST00000450095 GALT-201 34646589-34650598 protein_coding
  ENST00000465543 GALT-028 34646668-34648171 retained_intron
  ENST00000468099 GALT-024 34646633-34647517 retained_intron
  ENST00000472111 GALT-009 34646664-34648486 retained_intron
  ENST00000473506 GALT-017 34646638-34648894 nonsense_mediated_decay
  ENST00000473529 GALT-006 34646658-34648828 retained_intron
  ENST00000485531 GALT-004 34646845-34648376 retained_intron
  ENST00000487381 GALT-005 34646679-34648826 retained_intron
  ENST00000488412 GALT-008 34648922-34650583 processed_transcript
  ENST00000489643 GALT-010 34646675-34650116 retained_intron
  ENST00000554085 GALT-016 34646677-34649022 nonsense_mediated_decay
  ENST00000554139 GALT-019 34646652-34648381 retained_intron
  ENST00000554330 GALT-026 34646789-34647849 retained_intron
  ENST00000554550 GALT-014 34646636-34650529 nonsense_mediated_decay
  ENST00000554638 GALT-007 34646681-34650549 retained_intron
  ENST00000554897 GALT-018 34646675-34648375 nonsense_mediated_decay
  ENST00000554944 GALT-013 34646675-34648389 retained_intron
  ENST00000555020 GALT-011 34646675-34650282 retained_intron
  ENST00000555086 GALT-015 34646782-34649130 retained_intron
  ENST00000555214 GALT-020 34646696-34648637 retained_intron
  ENST00000555754 GALT-027 34648425-34650588 retained_intron
  ENST00000556157 GALT-022 34646900-34647762 retained_intron
  ENST00000556244 GALT-023 34647123-34648894 nonsense_mediated_decay
  ENST00000556403 GALT-025 34646773-34647794 retained_intron
  ENST00000556494 GALT-021 34646806-34648512 retained_intron
  ENST00000557541 GALT-003 34646645-34647905 processed_transcript
  ENST00000557706 GALT-012 34646893-34650562 retained_intron
  ENST00000605275 GALT-001 34638133-34647146 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000378842ENST00000450095ENST00000465543ENST00000473506ENST00000473529ENST00000488412ENST00000489643ENST00000554085ENST00000554550ENST00000554638ENST00000555020ENST00000555754
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000378842 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.106±0.00 6.798±0.00
ENST00000450095 5.155±0.00 N/A N/A N/A N/A N/A 7.595±4.33 N/A 17.258±0.00 N/A N/A N/A 11.395±0.00
ENST00000465543 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.620±0.00 23.941±0.00 12.384±0.00
ENST00000473506 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.429±0.00 N/A N/A
ENST00000473529 N/A N/A 6.444±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488412 N/A N/A N/A N/A 4.244±0.00 9.070±0.00 N/A 9.430±0.00 N/A N/A N/A N/A N/A
ENST00000489643 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.005±0.00 N/A
ENST00000554085 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.799±0.00
ENST00000554550 N/A N/A N/A N/A N/A N/A N/A 36.975±0.00 N/A 10.351±0.00 7.660±3.01 23.124±0.00 27.605±10.88
ENST00000554638 N/A N/A N/A 3.207±0.00 N/A N/A N/A 4.362±0.00 N/A 2.502±0.00 N/A N/A N/A
ENST00000555020 N/A 6.608±0.00 N/A N/A N/A N/A N/A N/A 1.506±0.00 N/A N/A N/A N/A
ENST00000555754 N/A N/A 15.291±0.00 N/A N/A N/A N/A N/A 13.818±6.20 6.052±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004KU CIL_0004KU_0001 CGP 9:34634722-34651035

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0005794 IDA Golgi apparatus
GO:0005829 TAS cytosol
GO:0005975 TAS carbohydrate metabolic process
GO:0006012 IEA:TAS galactose metabolic process
GO:0006258 IEA UDP-glucose catabolic process
GO:0008108 IEA UDP-glucose:hexose-1-phosphate uridylyltransferase activity
GO:0008270 IEA zinc ion binding
GO:0019388 TAS galactose catabolic process
GO:0044281 TAS small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000069543 galt galactose-1-phosphate uridylyltransferase protein_coding Danio_rerio
ENSMUSG00000036073 Galt galactose-1-phosphate uridyl transferase protein_coding Mus_musculus

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