C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0004KU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000147955-ENSG00000213930 CGP 9606 9:34634722-34651035
GeneTranscriptPositionBiotype
ENSG00000137070 (IL11RA)
interleukin 11 receptor, alpha
ENST00000318041 (IL11RA-001) 34653935-34661892 protein_coding
ENST00000441545 (IL11RA-012) 34652192-34661887 protein_coding
ENST00000466082 (IL11RA-005) 34659886-34661655 nonsense_mediated_decay
ENST00000478308 (IL11RA-003) 34653942-34656820 retained_intron
ENST00000478802 (IL11RA-004) 34655218-34657517 processed_transcript
ENST00000553620 (IL11RA-011) 34652200-34658561 protein_coding
ENST00000553969 (IL11RA-009) 34655412-34656950 retained_intron
ENST00000555003 (IL11RA-006) 34650702-34661881 protein_coding
ENST00000555247 (IL11RA-013) 34652162-34661887 nonsense_mediated_decay
ENST00000555579 (IL11RA-008) 34655131-34655937 retained_intron
ENST00000555981 (IL11RA-007) 34655084-34658683 protein_coding
ENST00000556531 (IL11RA-010) 34655035-34657442 protein_coding
ENST00000556792 (IL11RA-015) 34653864-34657122 protein_coding
ENST00000557298 (IL11RA-014) 34653946-34661850 nonsense_mediated_decay
ENST00000602473 (IL11RA-002) 34655218-34660819 protein_coding
ENSG00000147955 (SIGMAR1)
sigma non-opioid intracellular receptor 1
ENST00000277010 (SIGMAR1-001) 34634722-34637771 protein_coding
ENST00000353468 (SIGMAR1-003) 34634722-34637744 nonsense_mediated_decay
ENST00000378892 (SIGMAR1-002) 34634722-34637732 protein_coding
ENST00000461426 (SIGMAR1-006) 34635497-34637796 processed_transcript
ENST00000477726 (SIGMAR1-008) 34635483-34637809 protein_coding
ENST00000478146 (SIGMAR1-005) 34636751-34637412 processed_transcript
ENST00000497006 (SIGMAR1-007) 34635810-34637683 processed_transcript
ENSG00000213930 (GALT)
galactose-1-phosphate uridylyltransferase
ENST00000378842 (GALT-002) 34646663-34651035 protein_coding
ENST00000450095 (GALT-201) 34646589-34650598 protein_coding
ENST00000465543 (GALT-028) 34646668-34648171 retained_intron
ENST00000468099 (GALT-024) 34646633-34647517 retained_intron
ENST00000472111 (GALT-009) 34646664-34648486 retained_intron
ENST00000473506 (GALT-017) 34646638-34648894 nonsense_mediated_decay
ENST00000473529 (GALT-006) 34646658-34648828 retained_intron
ENST00000485531 (GALT-004) 34646845-34648376 retained_intron
ENST00000487381 (GALT-005) 34646679-34648826 retained_intron
ENST00000488412 (GALT-008) 34648922-34650583 processed_transcript
ENST00000489643 (GALT-010) 34646675-34650116 retained_intron
ENST00000554085 (GALT-016) 34646677-34649022 nonsense_mediated_decay
ENST00000554139 (GALT-019) 34646652-34648381 retained_intron
ENST00000554330 (GALT-026) 34646789-34647849 retained_intron
ENST00000554550 (GALT-014) 34646636-34650529 nonsense_mediated_decay
ENST00000554638 (GALT-007) 34646681-34650549 retained_intron
ENST00000554897 (GALT-018) 34646675-34648375 nonsense_mediated_decay
ENST00000554944 (GALT-013) 34646675-34648389 retained_intron
ENST00000555020 (GALT-011) 34646675-34650282 retained_intron
ENST00000555086 (GALT-015) 34646782-34649130 retained_intron
ENST00000555214 (GALT-020) 34646696-34648637 retained_intron
ENST00000555754 (GALT-027) 34648425-34650588 retained_intron
ENST00000556157 (GALT-022) 34646900-34647762 retained_intron
ENST00000556244 (GALT-023) 34647123-34648894 nonsense_mediated_decay
ENST00000556403 (GALT-025) 34646773-34647794 retained_intron
ENST00000556494 (GALT-021) 34646806-34648512 retained_intron
ENST00000557541 (GALT-003) 34646645-34647905 processed_transcript
ENST00000557706 (GALT-012) 34646893-34650562 retained_intron
ENST00000605275 (GALT-001) 34638133-34647146 retained_intron
CIL_0004KU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000036078-ENSMUSG00000036073 CGP 10090 4:41738493-41758695
GeneTranscriptPositionBiotype
ENSMUSG00000036073 (Galt)
galactose-1-phosphate uridyl transferase
ENSMUST00000084695 (Galt-001) 41755228-41758695 protein_coding
ENSMUST00000108038 (Galt-002) 41755228-41758695 protein_coding
ENSMUST00000130698 (Galt-008) 41756210-41758695 processed_transcript
ENSMUST00000132760 (Galt-006) 41755758-41757480 processed_transcript
ENSMUST00000133106 (Galt-010) 41756262-41757778 processed_transcript
ENSMUST00000135734 (Galt-004) 41755253-41756447 processed_transcript
ENSMUST00000147719 (Galt-007) 41755961-41757480 processed_transcript
ENSMUST00000150908 (Galt-003) 41755840-41757272 processed_transcript
ENSMUST00000151490 (Galt-005) 41755253-41757549 processed_transcript
ENSMUST00000154275 (Galt-009) 41756254-41758238 processed_transcript
ENSMUSG00000036078 (Sigmar1)
sigma non-opioid intracellular receptor 1
ENSMUST00000059354 (Sigmar1-001) 41738493-41741359 protein_coding
ENSMUST00000071561 (Sigmar1-002) 41738493-41741359 protein_coding
ENSMUST00000123524 (Sigmar1-008) 41754828-41756157 processed_transcript
ENSMUST00000133590 (Sigmar1-004) 41739506-41755399 processed_transcript
ENSMUST00000142840 (Sigmar1-007) 41740449-41741186 retained_intron
ENSMUST00000146655 (Sigmar1-005) 41740603-41741320 processed_transcript
ENSMUST00000148223 (Sigmar1-003) 41739101-41745072 processed_transcript
ENSMUST00000149647 (Sigmar1-006) 41740581-41741048 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004KU_0001ENSG00000137070ENST00000318041ENST00000441545ENST00000555247ENSG00000147955ENST00000277010ENST00000353468ENST00000497006ENSG00000213930ENST00000378842ENST00000450095ENST00000465543ENST00000473506ENST00000473529ENST00000488412ENST00000489643ENST00000554085ENST00000554550ENST00000554638ENST00000555020ENST00000555754CIL_0004KU_0002ENSMUSG00000036073ENSMUST00000084695ENSMUST00000108038ENSMUST00000130698ENSMUST00000150908ENSMUSG00000036078ENSMUST00000059354ENSMUST00000071561ENSMUST00000148223
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000137070 ENST00000318041 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 18.389±0.00 N/A N/A
ENST00000441545 N/A N/A N/A N/A N/A 13.768±0.00 13.639±0.00 N/A N/A 9.938±0.00 3.658±0.00 23.135±0.00 7.489±2.52 10.273±0.00
ENST00000466082 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478308 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478802 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553620 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553969 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555003 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555247 4.343±0.00 12.991±0.00 N/A 10.266±0.00 23.300±0.00 N/A 2.883±0.00 N/A 8.889±0.00 N/A 5.128±0.00 N/A N/A N/A
ENST00000555579 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555981 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556531 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556792 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557298 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000602473 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000147955 ENST00000277010 20.738±0.00 27.127±0.00 2.143±0.00 7.735±2.43 12.549±6.70 11.195±5.66 2.131±0.96 25.297±3.84 46.902±42.14 8.416±5.72 1.988±0.13 33.823±14.63 32.930±7.43 17.765±9.03
ENST00000353468 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.126±0.00 N/A N/A
ENST00000378892 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461426 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477726 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478146 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497006 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 26.719±0.00 N/A 5.811±0.00
ENSG00000213930 ENST00000378842 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.106±0.00 6.798±0.00 N/A
ENST00000450095 5.155±0.00 N/A N/A N/A N/A N/A 7.595±4.33 N/A 17.258±0.00 N/A N/A N/A 11.395±0.00 N/A
ENST00000465543 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.620±0.00 23.941±0.00 12.384±0.00 N/A
ENST00000468099 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472111 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473506 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.429±0.00 N/A N/A N/A
ENST00000473529 N/A N/A 6.444±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485531 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487381 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488412 N/A N/A N/A N/A 4.244±0.00 9.070±0.00 N/A 9.430±0.00 N/A N/A N/A N/A N/A N/A
ENST00000489643 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.005±0.00 N/A N/A
ENST00000554085 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.799±0.00 N/A
ENST00000554139 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554330 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554550 N/A N/A N/A N/A N/A N/A N/A 36.975±0.00 N/A 10.351±0.00 7.660±3.01 23.124±0.00 27.605±10.88 N/A
ENST00000554638 N/A N/A N/A 3.207±0.00 N/A N/A N/A 4.362±0.00 N/A 2.502±0.00 N/A N/A N/A N/A
ENST00000554897 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554944 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555020 N/A 6.608±0.00 N/A N/A N/A N/A N/A N/A 1.506±0.00 N/A N/A N/A N/A N/A
ENST00000555086 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555214 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555754 N/A N/A 15.291±0.00 N/A N/A N/A N/A N/A 13.818±6.20 6.052±0.00 N/A N/A N/A N/A
ENST00000556157 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556244 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556403 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000556494 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557541 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000557706 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000605275 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000036073 ENSMUST00000084695 16.765±2.91 22.490±2.25 14.376±1.52 11.772±1.91 22.019±2.51 29.535±1.41 27.176±4.78 42.212±3.42 44.193±19.28 20.077±0.73 15.157±1.13 18.194±2.63 9.385±1.01 2.877±0.52
ENSMUST00000108038 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.704±0.00 N/A
ENSMUST00000130698 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.912±0.00 9.167±0.00 N/A
ENSMUST00000132760 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133106 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135734 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147719 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150908 N/A N/A N/A 40.235±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151490 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154275 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000036078 ENSMUST00000059354 74.839±20.47 49.052±10.11 34.564±2.53 17.290±1.69 59.426±7.13 63.563±2.21 15.332±1.91 30.764±3.74 84.092±51.32 34.137±4.11 4.944±0.32 49.244±19.23 14.315±2.46 7.013±3.33
ENSMUST00000071561 N/A N/A N/A N/A 53.796±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000123524 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000133590 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142840 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146655 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148223 N/A N/A N/A N/A N/A N/A N/A N/A 66.578±0.24 N/A N/A 18.740±0.00 11.667±0.00 2.281±0.00
ENSMUST00000149647 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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