C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mitochondrial ribosomal protein L23
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000214026 MRPL23 9606 + 11:1947278-1984522 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000381514 MRPL23-002 1947341-1962838 protein_coding
  ENST00000381519 MRPL23-007 1947278-1956609 protein_coding
  ENST00000397294 MRPL23-011 1947344-1972793 protein_coding
  ENST00000397297 MRPL23-009 1947332-1984522 protein_coding
  ENST00000397298 MRPL23-001 1947278-1956609 protein_coding
  ENST00000429295 MRPL23-003 1950899-1956609 nonsense_mediated_decay
  ENST00000462288 MRPL23-004 1947554-1956609 processed_transcript
  ENST00000466346 MRPL23-006 1950910-1953322 retained_intron
  ENST00000484918 MRPL23-005 1955577-1956346 processed_transcript
  ENST00000486931 MRPL23-008 1949540-1951021 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000381514ENST00000381519ENST00000397294ENST00000429295ENST00000462288ENST00000466346ENST00000484918ENST00000486931
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000381514 N/A N/A N/A N/A 0.741±0.67 N/A N/A N/A N/A 1.283±0.00 1.089±0.00 N/A 0.930±0.00 N/A
ENST00000381519 9.382±0.00 8.204±0.00 N/A 1.375±0.86 4.909±4.47 3.020±2.33 6.907±0.00 6.898±5.57 7.214±0.00 4.675±4.46 3.803±1.14 4.736±5.71 4.640±0.17 4.277±0.00
ENST00000397294 N/A N/A N/A 0.365±0.24 N/A 0.193±0.00 N/A N/A 0.099±0.00 N/A N/A N/A N/A N/A
ENST00000429295 N/A N/A N/A N/A N/A 0.701±0.00 N/A N/A N/A N/A N/A 7.600±8.93 1.733±0.66 1.138±0.09
ENST00000462288 N/A N/A 0.561±0.00 0.315±0.00 N/A N/A 0.303±0.00 N/A 0.268±0.00 N/A N/A N/A N/A N/A
ENST00000466346 N/A N/A N/A N/A N/A N/A 0.100±0.00 N/A 0.200±0.00 0.474±0.00 N/A 0.473±0.06 N/A N/A
ENST00000484918 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.680±4.40 N/A N/A
ENST00000486931 N/A N/A N/A N/A N/A N/A N/A N/A 0.119±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008MR CIL_0008MR_0001 VISTA 11:1663842-2266142
CIL_0007RG CIL_0007RG_0001 VISTA 11:1668349-2271510
CIL_00097V CIL_00097V_0001 VISTA 11:1688064-2293510
CIL_00048I CIL_00048I_0001 CGP 11:1919562-1984522
CIL_0005N8 CIL_0005N8_0002 CGP 11:1947278-2149603

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003723 TAS RNA binding
GO:0003735 IEA structural constituent of ribosome
GO:0005622 IEA intracellular
GO:0005730 IDA nucleolus
GO:0005739 IDA mitochondrion
GO:0005762 TAS mitochondrial large ribosomal subunit
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045696 mrpl23 mitochondrial ribosomal protein L23 protein_coding Danio_rerio
ENSMUSG00000037772 Mrpl23 mitochondrial ribosomal protein L23 protein_coding Mus_musculus

Loading