C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00048I_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000130595-ENSG00000214026 CGP 9606 11:1919562-1984522
GeneTranscriptPositionBiotype
ENSG00000130595 (TNNT3)
troponin T type 3 (skeletal, fast) 		ENST00000278317 (TNNT3-001) 1919562-1938706 protein_coding
ENST00000344578 (TNNT3-011) 1919725-1938492 protein_coding
ENST00000381557 (TNNT3-006) 1919706-1938701 protein_coding
ENST00000381558 (TNNT3-004) 1921359-1938706 protein_coding
ENST00000381563 (TNNT3-012) 1919723-1938492 protein_coding
ENST00000381579 (TNNT3-003) 1919706-1938706 protein_coding
ENST00000381589 (TNNT3-002) 1919706-1938706 protein_coding
ENST00000397301 (TNNT3-010) 1922867-1938492 protein_coding
ENST00000397304 (TNNT3-014) 1922875-1938492 protein_coding
ENST00000446240 (TNNT3-015) 1922875-1938492 protein_coding
ENST00000453458 (TNNT3-007) 1919706-1934919 protein_coding
ENST00000473100 (TNNT3-016) 1938200-1938702 processed_transcript
ENST00000492075 (TNNT3-009) 1924918-1934655 processed_transcript
ENST00000493234 (TNNT3-008) 1933873-1935581 processed_transcript
ENSG00000214026 (MRPL23)
mitochondrial ribosomal protein L23 		ENST00000381514 (MRPL23-002) 1947341-1962838 protein_coding
ENST00000381519 (MRPL23-007) 1947278-1956609 protein_coding
ENST00000397294 (MRPL23-011) 1947344-1972793 protein_coding
ENST00000397297 (MRPL23-009) 1947332-1984522 protein_coding
ENST00000397298 (MRPL23-001) 1947278-1956609 protein_coding
ENST00000429295 (MRPL23-003) 1950899-1956609 nonsense_mediated_decay
ENST00000462288 (MRPL23-004) 1947554-1956609 processed_transcript
ENST00000466346 (MRPL23-006) 1950910-1953322 retained_intron
ENST00000484918 (MRPL23-005) 1955577-1956346 processed_transcript
ENST00000486931 (MRPL23-008) 1949540-1951021 processed_transcript
ENSG00000226416 (MRPL23-AS1)
MRPL23 antisense RNA 1 		ENST00000419080 (MRPL23-AS1-001) 1983237-1989920 antisense
CIL_00048I_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000061723-ENSMUSG00000037772 CGP 10090 7:142498836-142540747
GeneTranscriptPositionBiotype
ENSMUSG00000037772 (Mrpl23)
mitochondrial ribosomal protein L23 		ENSMUST00000038675 (Mrpl23-001) 142533012-142540747 protein_coding
ENSMUST00000137345 (Mrpl23-002) 142532799-142540737 processed_transcript
ENSMUST00000141098 (Mrpl23-004) 142536104-142537910 retained_intron
ENSMUST00000145002 (Mrpl23-003) 142534522-142537289 retained_intron
ENSMUSG00000043795 (Prr33)
proline rich 33 		ENSMUST00000054910 (Prr33-001) 142491074-142506771 protein_coding
ENSMUST00000151580 (Prr33-002) 142492750-142496971 processed_transcript
ENSMUSG00000061723 (Tnnt3)
troponin T3, skeletal, fast 		ENSMUST00000074187 (Tnnt3-201) 142498836-142516008 protein_coding
ENSMUST00000078497 (Tnnt3-001) 142498836-142516008 protein_coding
ENSMUST00000105941 (Tnnt3-013) 142501638-142515830 protein_coding
ENSMUST00000105942 (Tnnt3-010) 142501638-142515830 protein_coding
ENSMUST00000105943 (Tnnt3-012) 142501638-142515830 protein_coding
ENSMUST00000105944 (Tnnt3-017) 142501638-142515830 protein_coding
ENSMUST00000105945 (Tnnt3-016) 142501638-142515830 protein_coding
ENSMUST00000105946 (Tnnt3-014) 142501638-142515830 protein_coding
ENSMUST00000105947 (Tnnt3-011) 142501638-142515830 protein_coding
ENSMUST00000105948 (Tnnt3-015) 142501638-142515830 protein_coding
ENSMUST00000105949 (Tnnt3-009) 142498872-142516004 protein_coding
ENSMUST00000105950 (Tnnt3-202) 142498843-142516003 protein_coding
ENSMUST00000105952 (Tnnt3-007) 142498836-142516008 protein_coding
ENSMUST00000105953 (Tnnt3-002) 142498836-142516008 protein_coding
ENSMUST00000105954 (Tnnt3-005) 142498836-142516008 protein_coding
ENSMUST00000105955 (Tnnt3-008) 142498836-142516008 protein_coding
ENSMUST00000105957 (Tnnt3-203) 142498843-142516003 protein_coding
ENSMUST00000105958 (Tnnt3-006) 142498864-142516007 protein_coding
ENSMUST00000125649 (Tnnt3-003) 142498836-142516008 processed_transcript
ENSMUST00000128294 (Tnnt3-020) 142501617-142511536 protein_coding
ENSMUST00000144259 (Tnnt3-018) 142514130-142516009 retained_intron
ENSMUST00000146804 (Tnnt3-021) 142501620-142512622 protein_coding
ENSMUST00000153262 (Tnnt3-019) 142504023-142512585 retained_intron
ENSMUST00000169299 (Tnnt3-204) 142498843-142516003 protein_coding
ENSMUST00000179658 (Tnnt3-004) 142498836-142516008 protein_coding
ENSMUST00000180152 (Tnnt3-205) 142498843-142516003 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00048I_0001ENSG00000130595ENST00000278317ENST00000344578ENST00000381557ENST00000381558ENST00000381563ENST00000381579ENST00000381589ENST00000397301ENST00000397304ENST00000446240ENST00000453458ENST00000473100ENST00000492075ENST00000493234ENSG00000214026ENST00000381514ENST00000381519ENST00000397294ENST00000397297ENST00000397298ENST00000429295ENST00000462288ENST00000466346ENST00000484918ENST00000486931ENSG00000226416ENST00000419080CIL_00048I_0002ENSMUSG00000037772ENSMUST00000038675ENSMUST00000137345ENSMUST00000141098ENSMUST00000145002ENSMUSG00000043795ENSMUST00000054910ENSMUST00000151580ENSMUSG00000061723ENSMUST00000074187ENSMUST00000078497ENSMUST00000105941ENSMUST00000105942ENSMUST00000105943ENSMUST00000105944ENSMUST00000105945ENSMUST00000105946ENSMUST00000105947ENSMUST00000105948ENSMUST00000105949ENSMUST00000105950ENSMUST00000105952ENSMUST00000105953ENSMUST00000105954ENSMUST00000105955ENSMUST00000105957ENSMUST00000105958ENSMUST00000125649ENSMUST00000128294ENSMUST00000144259ENSMUST00000146804ENSMUST00000153262ENSMUST00000169299ENSMUST00000179658ENSMUST00000180152
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00048I_0001ENSG00000130595ENST00000278317ENST00000344578ENST00000381557ENST00000381558ENST00000381563ENST00000381579ENST00000381589ENST00000397301ENST00000397304ENST00000453458ENST00000473100ENST00000492075ENST00000493234ENSG00000214026ENST00000381514ENST00000381519ENST00000397294ENST00000429295ENST00000462288ENST00000466346ENST00000484918ENST00000486931ENSG00000226416ENST00000419080CIL_00048I_0002ENSMUSG00000037772ENSMUST00000038675ENSMUST00000137345ENSMUST00000145002ENSMUSG00000043795ENSMUST00000054910ENSMUSG00000061723ENSMUST00000074187ENSMUST00000078497ENSMUST00000105942ENSMUST00000105943ENSMUST00000105944ENSMUST00000105945ENSMUST00000105946ENSMUST00000105949ENSMUST00000105950ENSMUST00000105952ENSMUST00000105953ENSMUST00000105954ENSMUST00000105955ENSMUST00000105958ENSMUST00000125649ENSMUST00000128294ENSMUST00000144259ENSMUST00000146804ENSMUST00000153262ENSMUST00000169299ENSMUST00000179658
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000130595 ENST00000278317 N/A N/A N/A N/A N/A N/A 4.350±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000344578 N/A N/A N/A N/A 0.281±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000381557 N/A N/A N/A N/A 88.731±0.00 N/A 2.657±0.00 N/A N/A N/A N/A N/A N/A 7.675±0.00
ENST00000381558 N/A N/A N/A N/A N/A N/A 0.145±0.00 N/A N/A N/A N/A 0.046±0.00 N/A N/A
ENST00000381563 N/A N/A N/A 0.096±0.07 0.550±0.00 N/A N/A N/A N/A N/A 147.928±18.09 N/A N/A N/A
ENST00000381579 N/A N/A N/A N/A N/A N/A N/A N/A 0.867±0.00 N/A 118.379±27.09 N/A N/A N/A
ENST00000381589 23.294±0.00 N/A N/A N/A 117.932±117.49 5.050±0.00 6.855±0.00 N/A 1.947±0.00 0.777±0.00 325.099±69.67 N/A 1.854±0.00 5.867±3.06
ENST00000397301 N/A 1.428±0.00 N/A N/A N/A N/A 8.138±0.00 N/A 0.921±0.00 N/A N/A N/A N/A N/A
ENST00000397304 13.045±0.00 1.938±0.00 N/A 0.502±0.00 N/A 2.072±0.00 N/A N/A N/A 2.158±0.00 217.004±0.00 0.648±0.60 21.675±11.65 7.663±6.21
ENST00000446240 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000453458 N/A N/A N/A N/A N/A 0.411±0.00 N/A 0.457±0.00 0.031±0.00 N/A N/A N/A N/A N/A
ENST00000473100 N/A 2.832±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.925±0.00 N/A N/A
ENST00000492075 N/A N/A N/A N/A N/A N/A N/A 0.275±0.00 N/A N/A N/A N/A N/A N/A
ENST00000493234 N/A 0.895±0.00 0.039±0.00 N/A N/A N/A N/A 0.257±0.00 0.968±0.00 N/A N/A N/A N/A N/A
ENSG00000214026 ENST00000381514 N/A N/A N/A N/A 0.741±0.67 N/A N/A N/A N/A 1.283±0.00 1.089±0.00 N/A 0.930±0.00 N/A
ENST00000381519 9.382±0.00 8.204±0.00 N/A 1.375±0.86 4.909±4.47 3.020±2.33 6.907±0.00 6.898±5.57 7.214±0.00 4.675±4.46 3.803±1.14 4.736±5.71 4.640±0.17 4.277±0.00
ENST00000397294 N/A N/A N/A 0.365±0.24 N/A 0.193±0.00 N/A N/A 0.099±0.00 N/A N/A N/A N/A N/A
ENST00000397297 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000397298 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000429295 N/A N/A N/A N/A N/A 0.701±0.00 N/A N/A N/A N/A N/A 7.600±8.93 1.733±0.66 1.138±0.09
ENST00000462288 N/A N/A 0.561±0.00 0.315±0.00 N/A N/A 0.303±0.00 N/A 0.268±0.00 N/A N/A N/A N/A N/A
ENST00000466346 N/A N/A N/A N/A N/A N/A 0.100±0.00 N/A 0.200±0.00 0.474±0.00 N/A 0.473±0.06 N/A N/A
ENST00000484918 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 7.680±4.40 N/A N/A
ENST00000486931 N/A N/A N/A N/A N/A N/A N/A N/A 0.119±0.00 N/A N/A N/A N/A N/A
ENSG00000226416 ENST00000419080 N/A 0.553±0.00 N/A 0.140±0.00 N/A 0.357±0.00 0.059±0.00 0.212±0.00 N/A 0.758±0.00 0.493±0.00 2.697±1.62 0.978±0.28 0.846±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000037772 ENSMUST00000038675 31.705±4.62 23.788±3.64 60.561±6.89 19.792±12.92 27.046±7.96 23.238±3.51 47.948±11.06 34.018±13.42 43.473±14.51 28.105±1.94 52.733±11.86 27.385±8.64 18.070±22.86 7.189±0.57
ENSMUST00000137345 N/A N/A N/A 6.554±0.00 N/A N/A 8.372±0.00 25.333±0.00 N/A N/A 19.003±12.67 34.328±17.82 38.616±32.36 0.728±0.00
ENSMUST00000141098 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145002 N/A N/A N/A N/A 4.575±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.181±0.00
ENSMUSG00000043795 ENSMUST00000054910 N/A 1.264±0.25 N/A 0.103±0.00 50.724±1.96 N/A 9.983±0.27 N/A 0.206±0.15 N/A 71.500±2.05 7.718±5.04 0.893±0.42 0.182±0.12
ENSMUST00000151580 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000061723 ENSMUST00000074187 1.930±0.00 N/A 13.705±2.76 0.177±0.02 251.756±62.93 N/A N/A 13.183±0.00 N/A N/A 8087.094±1348.92 1.295±0.00 N/A N/A
ENSMUST00000078497 N/A N/A N/A 0.267±0.00 N/A N/A N/A N/A 0.520±0.42 N/A N/A N/A 1.332±0.00 N/A
ENSMUST00000105941 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000105942 0.451±0.29 N/A 8.379±0.00 0.207±0.05 247.763±0.00 N/A 0.059±0.02 N/A 0.129±0.04 N/A N/A 0.918±0.40 3.361±1.10 0.060±0.02
ENSMUST00000105943 N/A N/A N/A N/A N/A N/A 0.038±0.00 N/A 0.090±0.00 N/A N/A 1.516±0.00 N/A 0.044±0.00
ENSMUST00000105944 N/A N/A N/A N/A N/A N/A N/A N/A 0.385±0.00 N/A N/A N/A N/A N/A
ENSMUST00000105945 N/A N/A 7.933±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.997±0.00 N/A
ENSMUST00000105946 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.951±0.00 N/A N/A
ENSMUST00000105947 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000105948 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000105949 1.100±0.00 N/A N/A 0.333±0.00 0.155±0.00 0.186±0.00 0.371±0.00 N/A 0.090±0.04 N/A N/A 0.970±0.26 2.835±1.89 N/A
ENSMUST00000105950 N/A N/A N/A N/A N/A N/A 0.165±0.00 N/A N/A N/A N/A 1.860±0.00 N/A N/A
ENSMUST00000105952 N/A N/A 4.322±0.33 N/A 74.732±0.00 N/A 0.391±0.00 15.527±1.72 N/A 22.313±0.50 N/A N/A N/A N/A
ENSMUST00000105953 N/A N/A N/A N/A N/A N/A N/A N/A 0.718±0.00 N/A N/A 1.138±0.00 1.428±0.67 N/A
ENSMUST00000105954 N/A N/A N/A N/A N/A N/A N/A N/A 0.903±1.01 N/A N/A N/A 2.007±0.00 N/A
ENSMUST00000105955 N/A N/A N/A N/A N/A N/A N/A 7.892±0.29 0.161±0.00 N/A N/A 0.803±0.38 N/A N/A
ENSMUST00000105957 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000105958 N/A N/A N/A N/A N/A N/A N/A N/A 0.609±0.00 N/A N/A N/A N/A N/A
ENSMUST00000125649 N/A N/A N/A N/A N/A N/A N/A 0.051±0.00 N/A N/A N/A 0.400±0.00 1.883±0.56 N/A
ENSMUST00000128294 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.317±2.19 N/A
ENSMUST00000144259 2.223±0.74 0.538±0.01 N/A N/A 0.825±0.43 0.694±0.37 0.281±0.26 0.091±0.00 0.081±0.00 1.646±0.21 N/A 1.401±0.41 N/A 0.095±0.00
ENSMUST00000146804 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.041±0.00
ENSMUST00000153262 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.731±0.00 N/A
ENSMUST00000169299 N/A N/A 7.011±0.21 0.104±0.00 68.454±0.00 N/A N/A N/A 0.014±0.00 16.832±0.66 4543.717±896.49 N/A N/A N/A
ENSMUST00000179658 N/A N/A N/A N/A N/A N/A N/A N/A 0.125±0.00 N/A N/A 0.165±0.00 N/A N/A
ENSMUST00000180152 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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