C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: long intergenic non-protein coding RNA 887
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000214145 LINC00887 9606 - 3:194296465-194312803 lincRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000397644 LINC00887-003 194301446-194306031 lincRNA
  ENST00000414120 LINC00887-001 194301199-194312800 lincRNA
  ENST00000429578 LINC00887-002 194299635-194312803 lincRNA
  ENST00000456816 LINC00887-004 194296465-194312704 lincRNA

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000397644ENST00000414120ENST00000429578ENST00000456816
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000397644 N/A N/A N/A N/A N/A N/A N/A N/A 0.107±0.00 N/A N/A 1.213±0.00 0.068±0.00 0.983±0.00
ENST00000414120 0.005±0.00 0.116±0.00 N/A 0.093±0.00 0.039±0.00 0.063±0.00 0.014±0.00 0.247±0.00 0.032±0.00 0.079±0.00 0.004±0.00 0.121±0.05 0.016±0.00 0.626±0.41
ENST00000429578 0.074±0.00 0.050±0.00 0.196±0.00 0.174±0.02 0.215±0.14 0.314±0.29 0.009±0.00 0.193±0.00 0.220±0.17 0.052±0.00 0.037±0.02 0.143±0.06 0.058±0.01 0.193±0.00
ENST00000456816 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.213±0.00 0.070±0.01 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009A1 CIL_0009A1_0001 VISTA 3:193911571-194513668
CIL_0000N7 CIL_0000N7_0001 CGP 3:194136145-194351328

Gene Ontology

No GO terms available.

Homologs

No Homologs available.

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