C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000N7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000114315-ENSG00000178772 CGP 9606 3:194136145-194351328
GeneTranscriptPositionBiotype
ENSG00000114315 (HES1)
hes family bHLH transcription factor 1 		ENST00000232424 (HES1-001) 194136145-194138732 protein_coding
ENST00000476918 (HES1-002) 194136148-194137284 retained_intron
ENSG00000178772 (CPN2)
carboxypeptidase N, polypeptide 2 		ENST00000323830 (CPN2-001) 194339765-194351328 protein_coding
ENST00000429275 (CPN2-002) 194340772-194351318 protein_coding
ENSG00000214145 (LINC00887)
long intergenic non-protein coding RNA 887 		ENST00000397644 (LINC00887-003) 194301446-194306031 lincRNA
ENST00000414120 (LINC00887-001) 194301199-194312800 lincRNA
ENST00000429578 (LINC00887-002) 194299635-194312803 lincRNA
ENST00000456816 (LINC00887-004) 194296465-194312704 lincRNA
ENSG00000225742 (RP11-513G11.4)
 ENST00000415869 (RP11-513G11.4-001) 194203016-194250153 lincRNA
ENST00000432908 (RP11-513G11.4-002) 194203480-194206307 lincRNA
ENSG00000228271 (RP11-513G11.2)
 ENST00000440556 (RP11-513G11.2-001) 194276682-194287368 lincRNA
ENSG00000238097 (RP11-513G11.3)
 ENST00000455821 (RP11-513G11.3-001) 194247648-194257772 lincRNA
CIL_0000N7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022528-ENSMUSG00000023176 CGP 10090 16:30064384-30267532
GeneTranscriptPositionBiotype
ENSMUSG00000022528 (Hes1)
hairy and enhancer of split 1 (Drosophila) 		ENSMUST00000023171 (Hes1-001) 30065340-30067796 protein_coding
ENSMUST00000160592 (Hes1-004) 30064384-30065569 processed_transcript
ENSMUST00000161676 (Hes1-003) 30066097-30067123 retained_intron
ENSMUST00000161839 (Hes1-002) 30066338-30067319 processed_transcript
ENSMUSG00000023176 (Cpn2)
carboxypeptidase N, polypeptide 2 		ENSMUST00000064856 (Cpn2-201) 30256378-30267532 protein_coding
ENSMUSG00000097621 (Gm26562)
predicted gene, 26562 		ENSMUST00000181113 (Gm26562-201) 30200910-30205879 lincRNA
ENSMUSG00000101888 (RP23-11P15.2)
RIKEN cDNA 1700025H01 gene 		ENSMUST00000187479 (RP23-11P15.2-001) 30195071-30200299 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000N7_0001ENSG00000114315ENST00000232424ENST00000476918ENSG00000178772ENST00000323830ENST00000429275ENSG00000214145ENST00000397644ENST00000414120ENST00000429578ENST00000456816ENSG00000225742ENST00000415869ENST00000432908ENSG00000228271ENST00000440556ENSG00000238097ENST00000455821CIL_0000N7_0002ENSMUSG00000022528ENSMUST00000023171ENSMUST00000160592ENSMUST00000161676ENSMUST00000161839ENSMUSG00000023176ENSMUST00000064856ENSMUSG00000097621ENSMUST00000181113ENSMUSG00000101888ENSMUST00000187479
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000N7_0001ENSG00000114315ENST00000232424ENST00000476918ENSG00000178772ENST00000323830ENST00000429275ENSG00000214145ENST00000397644ENST00000414120ENST00000429578ENST00000456816ENSG00000225742ENST00000415869ENSG00000228271ENST00000440556ENSG00000238097ENST00000455821CIL_0000N7_0002ENSMUSG00000022528ENSMUST00000023171ENSMUST00000161676ENSMUST00000161839ENSMUSG00000023176ENSMUST00000064856ENSMUSG00000097621ENSMUST00000181113ENSMUSG00000101888ENSMUST00000187479
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000114315 ENST00000232424 18.832±0.00 14.011±0.00 5.316±0.00 2.463±0.37 10.160±2.89 7.947±1.63 2.322±0.93 12.817±9.85 7.715±1.55 21.694±13.98 8.515±1.76 34.589±16.81 16.048±1.08 11.201±0.16
ENST00000476918 N/A N/A N/A N/A N/A N/A N/A N/A 3.508±0.00 N/A N/A N/A N/A N/A
ENSG00000178772 ENST00000323830 0.075±0.00 0.097±0.00 0.929±0.00 0.086±0.00 0.090±0.01 0.094±0.00 0.065±0.00 17.384±0.00 113.523±0.00 0.096±0.00 0.013±0.01 0.078±0.07 0.101±0.04 0.181±0.12
ENST00000429275 N/A N/A 0.589±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.069±0.00 N/A
ENSG00000214145 ENST00000397644 N/A N/A N/A N/A N/A N/A N/A N/A 0.107±0.00 N/A N/A 1.213±0.00 0.068±0.00 0.983±0.00
ENST00000414120 0.005±0.00 0.116±0.00 N/A 0.093±0.00 0.039±0.00 0.063±0.00 0.014±0.00 0.247±0.00 0.032±0.00 0.079±0.00 0.004±0.00 0.121±0.05 0.016±0.00 0.626±0.41
ENST00000429578 0.074±0.00 0.050±0.00 0.196±0.00 0.174±0.02 0.215±0.14 0.314±0.29 0.009±0.00 0.193±0.00 0.220±0.17 0.052±0.00 0.037±0.02 0.143±0.06 0.058±0.01 0.193±0.00
ENST00000456816 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.213±0.00 0.070±0.01 N/A
ENSG00000225742 ENST00000415869 N/A N/A N/A 0.038±0.00 0.107±0.00 N/A 0.065±0.00 N/A 0.031±0.00 0.156±0.00 N/A 0.096±0.00 0.237±0.08 0.567±0.05
ENST00000432908 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000228271 ENST00000440556 0.009±0.00 0.047±0.00 N/A N/A N/A N/A 0.009±0.00 0.038±0.00 0.008±0.00 N/A N/A 0.042±0.02 N/A 0.076±0.00
ENSG00000238097 ENST00000455821 0.027±0.00 0.029±0.00 N/A 0.047±0.00 0.015±0.00 0.027±0.00 N/A 0.319±0.29 2.152±0.00 N/A N/A 0.017±0.00 0.227±0.21 0.047±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022528 ENSMUST00000023171 7.682±3.64 22.619±12.11 57.739±14.91 8.707±3.59 14.063±9.52 53.718±11.65 7.751±3.82 15.399±5.15 5.775±1.25 34.966±16.19 5.650±0.80 26.347±10.95 8.124±3.72 1.221±0.62
ENSMUST00000160592 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161676 12.095±2.87 52.734±15.54 52.939±13.91 17.061±1.77 81.086±30.92 118.290±34.03 13.028±0.14 22.246±12.30 9.155±2.08 78.146±31.16 N/A 86.659±39.27 8.491±0.06 3.830±0.00
ENSMUST00000161839 3.926±0.00 20.283±5.99 N/A 4.840±0.00 26.666±3.65 65.628±18.83 N/A 9.960±0.00 N/A 30.486±10.47 N/A 66.481±15.61 N/A N/A
ENSMUSG00000023176 ENSMUST00000064856 0.236±0.09 0.850±0.11 0.008±0.00 N/A 0.767±0.18 1.124±0.24 0.480±0.33 0.208±0.03 77.022±67.60 0.347±0.12 0.012±0.00 0.076±0.05 0.343±0.43 0.009±0.00
ENSMUSG00000097621 ENSMUST00000181113 0.045±0.02 0.046±0.00 0.034±0.00 0.054±0.02 0.070±0.03 0.067±0.02 0.023±0.01 0.045±0.04 0.026±0.01 0.045±0.02 0.026±0.00 0.145±0.06 0.032±0.01 N/A
ENSMUSG00000101888 ENSMUST00000187479 N/A N/A N/A N/A N/A N/A N/A N/A 0.066±0.00 0.101±0.00 N/A 0.329±0.11 0.045±0.00 8.232±6.16

Loading