C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: UBX domain protein 2B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000215114 UBXN2B 9606 + 8:58411264-58451501 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000399598 UBXN2B-001 58411264-58451501 protein_coding
  ENST00000520732 UBXN2B-004 58411381-58446065 nonsense_mediated_decay
  ENST00000521796 UBXN2B-006 58416930-58435106 protein_coding
  ENST00000522978 UBXN2B-002 58411359-58434941 processed_transcript
  ENST00000523409 UBXN2B-005 58411381-58447684 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000399598ENST00000520732ENST00000521796ENST00000522978
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000399598 1.808±0.00 1.404±0.00 N/A 4.129±0.00 2.112±0.00 2.324±1.25 1.602±1.02 3.369±0.91 1.258±0.21 1.693±0.31 1.412±0.56 1.698±1.16 1.143±0.21 3.118±1.89
ENST00000520732 N/A N/A 1.900±0.00 N/A 2.216±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521796 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.003±0.00 N/A
ENST00000522978 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.658±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007X3 CIL_0007X3_0001 VISTA 8:57844305-58447998
CIL_0008CM CIL_0008CM_0001 VISTA 8:57955651-58557562
CIL_0003J1 CIL_0003J1_0001 CGP 8:57994509-58451501
CIL_0002RI CIL_0002RI_0001 CGP 8:58411264-58500236

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005783 IEA endoplasmic reticulum
GO:0005794 IEA Golgi apparatus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000028243 Ubxn2b UBX domain protein 2B protein_coding Mus_musculus

Loading