C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: COBW domain containing 7
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000215126 CBWD7 9606 - 9:41131306-41199261 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000377391 CBWD7-005 41131308-41189436 protein_coding
  ENST00000382436 CBWD7-007 41131325-41189127 nonsense_mediated_decay
  ENST00000456520 CBWD7-001 41131309-41189310 protein_coding
  ENST00000457288 CBWD7-014 41131703-41142291 processed_transcript
  ENST00000467791 CBWD7-012 41145318-41182395 nonsense_mediated_decay
  ENST00000486387 CBWD7-003 41131678-41189339 nonsense_mediated_decay
  ENST00000490294 CBWD7-011 41156395-41170344 processed_transcript
  ENST00000494538 CBWD7-009 41131356-41189301 nonsense_mediated_decay
  ENST00000610358 CBWD7-008 41131677-41176914 processed_transcript
  ENST00000610377 CBWD7-013 41164133-41174324 retained_intron
  ENST00000611553 CBWD7-010 41131356-41145992 retained_intron
  ENST00000613125 CBWD7-006 41131676-41177919 processed_transcript
  ENST00000613716 CBWD7-201 41131306-41189364 protein_coding
  ENST00000617722 CBWD7-002 41131679-41199261 processed_transcript
  ENST00000617917 CBWD7-004 41131358-41158916 retained_intron
  ENST00000617933 CBWD7-202 41171920-41189436 protein_coding
  ENST00000620776 CBWD7-017 41165024-41183574 nonsense_mediated_decay
  ENST00000622791 CBWD7-016 41131678-41134034 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000382436ENST00000456520ENST00000457288ENST00000467791ENST00000486387ENST00000490294ENST00000610377ENST00000611553ENST00000613125ENST00000617722ENST00000617917ENST00000622791
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000382436 N/A N/A 1.569±0.00 1.037±0.00 1.272±0.00 0.967±0.00 0.050±0.00 0.341±0.00 0.199±0.00 0.580±0.00 0.504±0.00 0.017±0.00 0.024±0.00 N/A
ENST00000456520 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.030±0.00 N/A
ENST00000457288 0.216±0.00 0.661±0.00 N/A 0.370±0.00 N/A 0.252±0.00 0.072±0.00 0.397±0.00 0.503±0.00 0.351±0.00 N/A 1.118±0.59 0.304±0.22 0.372±0.06
ENST00000467791 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.292±0.00 0.069±0.00 N/A N/A
ENST00000486387 N/A N/A N/A N/A N/A N/A N/A N/A 0.047±0.00 N/A N/A N/A N/A N/A
ENST00000490294 N/A N/A N/A N/A N/A N/A 0.079±0.00 0.270±0.00 N/A 0.280±0.00 N/A N/A 0.300±0.26 0.405±0.00
ENST00000610377 N/A N/A 1.103±0.00 N/A 1.423±0.00 0.673±0.00 0.040±0.02 0.340±0.00 N/A 0.547±0.00 N/A 1.193±0.00 N/A 0.121±0.00
ENST00000611553 0.016±0.00 N/A N/A N/A 0.011±0.00 N/A N/A 0.060±0.04 N/A N/A N/A 0.092±0.00 N/A N/A
ENST00000613125 N/A N/A N/A N/A 0.355±0.00 N/A N/A N/A 0.087±0.00 N/A N/A 0.122±0.11 N/A 0.112±0.00
ENST00000617722 0.019±0.00 0.327±0.00 N/A 0.346±0.05 0.064±0.00 0.108±0.00 0.020±0.00 0.234±0.00 N/A 0.076±0.00 0.005±0.00 0.356±0.32 N/A 0.093±0.00
ENST00000617917 0.016±0.00 0.066±0.00 N/A N/A 0.018±0.00 N/A 0.034±0.00 N/A 0.027±0.01 N/A N/A N/A 0.024±0.00 N/A
ENST00000622791 N/A N/A N/A N/A 0.047±0.00 N/A N/A N/A N/A N/A N/A 0.412±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000VT CIL_0000VT_0003 CGP 9:41126430-41199261

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000004318 cbwd COBW domain containing protein_coding Danio_rerio
ENSMUSG00000024878 Cbwd1 COBW domain containing 1 protein_coding Mus_musculus

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