C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000VT_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000170122-ENSG00000172785 CGP 9606 9:116231-179147
GeneTranscriptPositionBiotype
ENSG00000170122 (FOXD4)
forkhead box D4 		ENST00000382500 (FOXD4-001) 116231-118204 protein_coding
CIL_0000VT_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000204779-ENSG00000147996 CGP 9606 9:65282101-65734041
GeneTranscriptPositionBiotype
ENSG00000147996 (CBWD5)
COBW domain containing 5 		ENST00000377380 (CBWD5-013) 65675875-65682026 retained_intron
ENST00000377384 (CBWD5-012) 65675875-65682577 protein_coding
ENST00000377389 (CBWD5-011) 65675837-65733673 nonsense_mediated_decay
ENST00000377392 (CBWD5-201) 65675834-65734040 protein_coding
ENST00000377395 (CBWD5-026) 65675938-65733676 protein_coding
ENST00000382404 (CBWD5-003) 65675987-65701415 retained_intron
ENST00000382405 (CBWD5-001) 65675799-65734041 protein_coding
ENST00000429800 (CBWD5-023) 65675928-65733673 protein_coding
ENST00000430059 (CBWD5-008) 65675924-65733674 protein_coding
ENST00000441808 (CBWD5-004) 65668805-65681662 processed_transcript
ENST00000461932 (CBWD5-009) 65719385-65733994 retained_intron
ENST00000463075 (CBWD5-016) 65731336-65733672 retained_intron
ENST00000464913 (CBWD5-031) 65675941-65679212 processed_transcript
ENST00000465474 (CBWD5-024) 65675930-65732241 nonsense_mediated_decay
ENST00000468066 (CBWD5-007) 65708906-65733580 processed_transcript
ENST00000468198 (CBWD5-028) 65690967-65704923 retained_intron
ENST00000469921 (CBWD5-018) 65675858-65703471 nonsense_mediated_decay
ENST00000471620 (CBWD5-034) 65693393-65703303 retained_intron
ENST00000472916 (CBWD5-032) 65681615-65703014 processed_transcript
ENST00000476161 (CBWD5-019) 65675894-65732393 nonsense_mediated_decay
ENST00000476797 (CBWD5-027) 65688401-65733673 processed_transcript
ENST00000478650 (CBWD5-005) 65681574-65683342 retained_intron
ENST00000480229 (CBWD5-022) 65675906-65733859 nonsense_mediated_decay
ENST00000480819 (CBWD5-017) 65719955-65733671 retained_intron
ENST00000485088 (CBWD5-029) 65706433-65733992 retained_intron
ENST00000486191 (CBWD5-035) 65723084-65733647 processed_transcript
ENST00000486221 (CBWD5-025) 65675930-65733672 nonsense_mediated_decay
ENST00000486466 (CBWD5-030) 65675925-65679544 retained_intron
ENST00000489273 (CBWD5-037) 65700287-65733671 protein_coding
ENST00000491485 (CBWD5-038) 65732693-65733674 retained_intron
ENST00000495615 (CBWD5-036) 65693386-65701108 retained_intron
ENST00000496364 (CBWD5-033) 65690967-65708958 processed_transcript
ENST00000497250 (CBWD5-020) 65675896-65733670 nonsense_mediated_decay
ENSG00000204778 (RP11-15J10.1)
 ENST00000445695 (RP11-15J10.1-001) 65287914-65323015 unprocessed_pseudogene
ENSG00000204779 (FOXD4L5)
forkhead box D4-like 5 		ENST00000377420 (FOXD4L5-001) 65282101-65285209 protein_coding
ENSG00000280286 (ABC14-1080714F14.1)
 ENST00000623592 (ABC14-1080714F14.1-001) 65646982-65652679 unprocessed_pseudogene
CIL_0000VT_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000273514-ENSG00000215126 CGP 9606 9:41126430-41199261
GeneTranscriptPositionBiotype
ENSG00000273514 (FOXD4L6)
forkhead box D4-like 6 		ENST00000622588 (FOXD4L6-001) 41126430-41128463 protein_coding
CIL_0000VT_0004 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000051490-ENSMUSG00000024878 CGP 10090 19:24898965-24961616
GeneTranscriptPositionBiotype
ENSMUSG00000024878 (Cbwd1)
COBW domain containing 1 		ENSMUST00000025815 (Cbwd1-201) 24919916-24961616 protein_coding
ENSMUSG00000051490 (Foxd4)
forkhead box D4 		ENSMUST00000058600 (Foxd4-201) 24898965-24901309 protein_coding
ENSMUSG00000095097 (Gm23658)
predicted gene, 23658 		ENSMUST00000083233 (Gm23658-201) 24942236-24942367 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000VT_0001ENSG00000170122ENST00000382500CIL_0000VT_0002ENSG00000147996ENST00000377380ENST00000377384ENST00000377389ENST00000377392ENST00000377395ENST00000382404ENST00000382405ENST00000429800ENST00000430059ENST00000441808ENST00000461932ENST00000463075ENST00000464913ENST00000465474ENST00000468066ENST00000468198ENST00000469921ENST00000471620ENST00000472916ENST00000476161ENST00000476797ENST00000478650ENST00000480229ENST00000480819ENST00000485088ENST00000486191ENST00000486221ENST00000486466ENST00000489273ENST00000491485ENST00000495615ENST00000496364ENST00000497250ENSG00000204778ENST00000445695ENSG00000204779ENST00000377420ENSG00000280286ENST00000623592CIL_0000VT_0003ENSG00000273514ENST00000622588CIL_0000VT_0004ENSMUSG00000024878ENSMUST00000025815ENSMUSG00000051490ENSMUST00000058600ENSMUSG00000095097ENSMUST00000083233
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000VT_0001ENSG00000170122ENST00000382500CIL_0000VT_0002ENSG00000147996ENST00000377380ENST00000377384ENST00000377392ENST00000377395ENST00000382404ENST00000429800ENST00000430059ENST00000461932ENST00000463075ENST00000464913ENST00000468066ENST00000468198ENST00000469921ENST00000478650ENST00000480229ENST00000480819ENST00000485088ENST00000486191ENST00000486466ENST00000489273ENST00000491485ENST00000495615ENST00000497250ENSG00000204778ENST00000445695ENSG00000204779ENST00000377420ENSG00000280286ENST00000623592CIL_0000VT_0003ENSG00000273514ENST00000622588CIL_0000VT_0004ENSMUSG00000024878ENSMUST00000025815ENSMUSG00000051490ENSMUST00000058600ENSMUSG00000095097ENSMUST00000083233
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000170122 ENST00000382500 0.066±0.00 N/A 0.077±0.00 0.109±0.00 0.014±0.00 0.030±0.00 N/A 0.057±0.00 0.025±0.00 0.089±0.00 N/A 0.141±0.05 0.101±0.04 0.509±0.46
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000147996 ENST00000377380 N/A N/A N/A N/A N/A N/A 0.356±0.00 4.185±0.00 1.603±0.00 3.364±0.00 N/A N/A 0.473±0.00 0.980±0.00
ENST00000377384 N/A N/A 0.924±0.00 1.353±0.00 2.679±0.00 1.695±0.00 0.169±0.08 N/A 0.239±0.00 N/A N/A N/A N/A N/A
ENST00000377389 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000377392 N/A N/A N/A 0.352±0.00 N/A N/A N/A N/A N/A N/A N/A 0.324±0.00 N/A 0.095±0.00
ENST00000377395 N/A N/A N/A N/A N/A 0.161±0.00 0.151±0.00 2.004±0.00 N/A N/A N/A N/A N/A N/A
ENST00000382404 N/A N/A N/A 0.943±0.00 N/A 0.835±0.00 N/A 1.655±0.00 N/A N/A N/A 0.408±0.33 N/A N/A
ENST00000382405 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000429800 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.156±0.00 N/A
ENST00000430059 0.471±0.00 N/A N/A N/A N/A N/A N/A N/A 0.428±0.00 N/A N/A N/A N/A N/A
ENST00000441808 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461932 N/A N/A N/A N/A N/A 0.403±0.00 0.031±0.00 N/A N/A N/A N/A 0.368±0.00 0.064±0.00 N/A
ENST00000463075 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.314±0.00
ENST00000464913 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.586±0.00 N/A N/A N/A
ENST00000465474 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468066 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.425±0.00 N/A
ENST00000468198 0.132±0.00 0.625±0.00 0.768±0.00 0.607±0.19 1.059±0.83 0.520±0.46 0.216±0.14 0.823±0.00 1.044±0.00 1.192±0.00 0.157±0.00 0.550±0.32 0.078±0.00 0.566±0.00
ENST00000469921 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.213±0.05 N/A
ENST00000471620 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472916 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476161 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476797 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478650 N/A N/A N/A N/A N/A N/A 0.173±0.00 N/A N/A N/A N/A 3.382±0.00 N/A N/A
ENST00000480229 N/A 0.820±0.00 N/A N/A 0.468±0.00 N/A N/A N/A 0.266±0.00 N/A 0.062±0.00 N/A N/A N/A
ENST00000480819 N/A N/A N/A N/A N/A 0.429±0.00 N/A N/A N/A N/A N/A N/A N/A 1.329±0.00
ENST00000485088 0.083±0.00 0.362±0.00 N/A 0.395±0.18 0.684±0.50 0.234±0.18 0.113±0.06 0.275±0.00 0.324±0.23 0.696±0.00 0.025±0.00 0.520±0.35 0.091±0.03 0.481±0.00
ENST00000486191 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.258±0.00 N/A N/A N/A
ENST00000486221 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486466 N/A N/A 2.802±0.00 N/A N/A N/A 0.795±0.00 N/A 2.503±0.00 1.823±0.00 N/A 3.928±0.00 N/A N/A
ENST00000489273 N/A N/A N/A N/A N/A 0.414±0.00 N/A N/A N/A N/A 0.294±0.00 0.536±0.00 N/A N/A
ENST00000491485 0.400±0.00 N/A N/A N/A 0.677±0.00 N/A N/A 1.816±0.00 N/A N/A N/A N/A 0.385±0.00 0.318±0.00
ENST00000495615 N/A N/A 1.685±0.00 N/A N/A N/A N/A N/A N/A 2.739±0.00 0.473±0.00 N/A N/A N/A
ENST00000496364 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497250 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.286±0.00 N/A
ENSG00000204778 ENST00000445695 N/A 0.016±0.00 0.151±0.00 0.108±0.00 0.113±0.07 0.104±0.00 N/A N/A 0.258±0.00 0.071±0.00 N/A 0.144±0.09 0.165±0.00 0.046±0.00
ENSG00000204779 ENST00000377420 N/A 0.071±0.00 N/A 0.127±0.08 0.102±0.00 N/A 0.028±0.00 0.177±0.00 0.016±0.00 0.104±0.07 0.068±0.00 0.084±0.05 0.047±0.01 0.117±0.04
ENSG00000280286 ENST00000623592 N/A 0.062±0.00 N/A 0.028±0.00 N/A 0.082±0.00 N/A N/A 0.028±0.00 N/A N/A 0.023±0.00 0.027±0.00 0.048±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000273514 ENST00000622588 N/A N/A N/A 0.030±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024878 ENSMUST00000025815 1.630±0.42 2.430±0.96 3.113±0.56 2.469±0.65 1.374±0.38 0.943±0.56 1.330±0.32 1.833±0.35 2.309±1.63 1.343±0.41 3.676±0.33 1.865±1.34 9.100±3.50 4.937±1.56
ENSMUSG00000051490 ENSMUST00000058600 0.009±0.00 0.026±0.00 N/A 0.089±0.05 N/A N/A 0.015±0.00 N/A 0.054±0.05 0.073±0.04 N/A 0.028±0.00 0.018±0.01 0.162±0.08
ENSMUSG00000095097 ENSMUST00000083233 N/A N/A N/A N/A N/A N/A N/A N/A 1.904±0.00 N/A N/A N/A N/A N/A

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