C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: melanoma antigen family A, 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000221867 MAGEA3 9606 + X:152698752-152702347 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000370278 MAGEA3-001 152698752-152702347 protein_coding
  ENST00000417212 MAGEA3-002 152698767-152701427 protein_coding
  ENST00000598245 MAGEA3-201 152698767-152702336 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; PlacentaTestisENST00000370278ENST00000598245
Transcript ID Placenta Testis
ENST00000370278 0.109±0.07 2.212±1.42
ENST00000598245 N/A 1.024±0.42

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001AT CIL_0001AT_0003 CGP X:152698752-152718607

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058212 ndnl2 necdin-like 2 protein_coding Danio_rerio
ENSMUSG00000031118 1700080O16Rik RIKEN cDNA 1700080O16 gene protein_coding Mus_musculus
ENSMUSG00000031179 3830417A13Rik RIKEN cDNA 3830417A13 gene protein_coding Mus_musculus
ENSMUSG00000033343 Magea4 melanoma antigen, family A, 4 protein_coding Mus_musculus
ENSMUSG00000043453 Magea10 melanoma antigen family A, 10 protein_coding Mus_musculus
ENSMUSG00000055746 Magea2 melanoma antigen, family A, 2 protein_coding Mus_musculus
ENSMUSG00000063728 Magea6 melanoma antigen, family A, 6 protein_coding Mus_musculus
ENSMUSG00000079349 Magea5 melanoma antigen, family A, 5 protein_coding Mus_musculus
ENSMUSG00000079350 Magea8 melanoma antigen, family A, 8 protein_coding Mus_musculus
ENSMUSG00000094196 Magea3 melanoma antigen, family A, 3 protein_coding Mus_musculus
ENSMUSG00000096644 Magea1 melanoma antigen, family A, 1 protein_coding Mus_musculus

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