C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: neuronal pentraxin receptor
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000221890 NPTXR 9606 - 22:38818452-38843982 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000333039 NPTXR-001 38818452-38843982 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000333039
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000333039 1.147±0.00 3.508±0.00 0.078±0.00 30.696±22.30 1.622±1.45 5.531±0.00 3.279±2.83 0.969±0.93 0.300±0.10 0.995±0.73 0.164±0.14 2.616±3.01 0.313±0.08 1.456±1.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005NI CIL_0005NI_0001 CGP 22:38778508-38843982
CIL_0005NH CIL_0005NH_0001 CGP 22:38818452-38872314

Gene Ontology
GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000040430 nptxra neuronal pentraxin receptor a protein_coding Danio_rerio
ENSDARG00000053375 nptxrb neuronal pentraxin receptor b protein_coding Danio_rerio
ENSMUSG00000022421 Nptxr neuronal pentraxin receptor protein_coding Mus_musculus
ENSMUSG00000089837 Npcd neuronal pentraxin chromo domain protein_coding Mus_musculus

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