C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: family with sequence similarity 185, member A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000222011 FAM185A 9606 + 7:102748971-102809225 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000409231 FAM185A-003 102749028-102808840 protein_coding
  ENST00000413034 FAM185A-009 102749208-102808402 protein_coding
  ENST00000418198 FAM185A-004 102749037-102757876 protein_coding
  ENST00000420217 FAM185A-001 102749010-102809224 nonsense_mediated_decay
  ENST00000442873 FAM185A-002 102748971-102809225 nonsense_mediated_decay
  ENST00000481697 FAM185A-006 102748971-102779810 processed_transcript
  ENST00000487807 FAM185A-007 102748978-102787370 processed_transcript
  ENST00000496790 FAM185A-005 102749442-102755399 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000409231ENST00000413034ENST00000418198ENST00000420217ENST00000442873ENST00000481697ENST00000487807
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000409231 0.371±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.212±0.00 0.442±0.00 3.664±0.00 0.596±0.00 N/A
ENST00000413034 N/A N/A 1.890±0.00 1.674±0.00 2.570±0.00 N/A N/A 4.131±0.00 1.737±0.00 0.847±0.00 N/A 8.204±0.00 2.371±0.00 1.202±0.87
ENST00000418198 N/A N/A N/A N/A 2.158±0.71 N/A 1.237±0.00 N/A N/A 0.804±0.00 3.668±0.00 N/A 0.881±0.00 3.378±0.00
ENST00000420217 0.431±0.00 0.391±0.00 N/A 0.659±0.13 0.969±0.00 0.521±0.06 0.213±0.00 N/A 1.216±0.00 N/A 0.250±0.09 1.106±0.59 0.493±0.05 0.481±0.06
ENST00000442873 N/A N/A N/A 0.400±0.00 N/A 0.721±0.00 0.231±0.00 N/A N/A 0.240±0.00 0.776±0.00 0.400±0.06 N/A 0.488±0.00
ENST00000481697 N/A N/A N/A N/A N/A 1.499±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487807 N/A N/A N/A 3.552±0.00 N/A 3.007±0.00 2.149±0.00 3.611±0.00 N/A 1.406±1.10 1.394±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007Y6 CIL_0007Y6_0001 VISTA 7:102540897-103142421
CIL_0005CF CIL_0005CF_0001 CGP 7:102748971-103074843

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000019142 FAM185A family with sequence similarity 185, member A protein_coding Danio_rerio
ENSMUSG00000047221 Fam185a family with sequence similarity 185, member A protein_coding Mus_musculus

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