C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: major histocompatibility complex, class I, B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000223532 HLA-B 9606 - CHR_HSCHR6_MHC_COX_CTG1:31344351-31347723 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000416726 HLA-B-006 31344351-31346880 protein_coding
  ENST00000425848 HLA-B-001 31344351-31347723 protein_coding
  ENST00000445222 HLA-B-003 31345986-31347666 protein_coding
  ENST00000461583 HLA-B-004 31345661-31347638 nonsense_mediated_decay
  ENST00000470915 HLA-B-002 31345870-31347657 retained_intron
  ENST00000472294 HLA-B-008 31344351-31345285 retained_intron
  ENST00000473379 HLA-B-007 31344351-31345555 retained_intron
  ENST00000490676 HLA-B-005 31345601-31346279 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0001916 IEA positive regulation of T cell mediated cytotoxicity
GO:0002474 TAS antigen processing and presentation of peptide antigen via MHC class I
GO:0002479 TAS antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent
GO:0002480 TAS antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-independent
GO:0005515 IEA protein binding
GO:0005783 ISS endoplasmic reticulum
GO:0005794 ISS Golgi apparatus
GO:0005886 TAS plasma membrane
GO:0005887 NAS integral component of plasma membrane
GO:0006955 IEA immune response
GO:0009986 ISS cell surface
GO:0012507 TAS ER to Golgi transport vesicle membrane
GO:0016020 IEA membrane
GO:0016032 IEA viral process
GO:0019221 TAS cytokine-mediated signaling pathway
GO:0019882 IEA antigen processing and presentation
GO:0030670 TAS phagocytic vesicle membrane
GO:0031901 TAS early endosome membrane
GO:0042590 TAS antigen processing and presentation of exogenous peptide antigen via MHC class I
GO:0042605 ISS peptide antigen binding
GO:0042612 IEA MHC class I protein complex
GO:0045087 TAS innate immune response
GO:0046977 IDA TAP binding
GO:0050776 TAS regulation of immune response
GO:0051087 IPI chaperone binding
GO:0060333 TAS interferon-gamma-mediated signaling pathway
GO:0060337 TAS type I interferon signaling pathway
GO:0070062 IDA extracellular vesicular exosome
GO:0071556 TAS integral component of lumenal side of endoplasmic reticulum membrane

Homologs

No Homologs available.

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