C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: major histocompatibility complex, class I, A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000223980 HLA-A 9606 + CHR_HSCHR6_MHC_SSTO_CTG1:29930538-29935179 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000414592 HLA-A-003 29931828-29935179 protein_coding
  ENST00000454091 HLA-A-001 29930538-29935179 protein_coding
  ENST00000462986 HLA-A-007 29931833-29934576 retained_intron
  ENST00000463148 HLA-A-004 29931827-29935179 retained_intron
  ENST00000464713 HLA-A-005 29931831-29935179 retained_intron
  ENST00000478258 HLA-A-006 29931833-29934576 retained_intron
  ENST00000488889 HLA-A-002 29931524-29935179 processed_transcript
  ENST00000552493 HLA-A-205 29931749-29935179 protein_coding
  ENST00000612644 HLA-A-206 29931749-29935179 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0001916 IEA positive regulation of T cell mediated cytotoxicity
GO:0002474 TAS antigen processing and presentation of peptide antigen via MHC class I
GO:0002479 TAS antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent
GO:0002480 TAS antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-independent
GO:0005515 IEA protein binding
GO:0005783 ISS endoplasmic reticulum
GO:0005794 ISS Golgi apparatus
GO:0005886 TAS plasma membrane
GO:0006955 IEA immune response
GO:0009986 ISS cell surface
GO:0012507 TAS ER to Golgi transport vesicle membrane
GO:0016020 IEA membrane
GO:0016032 IEA viral process
GO:0019221 TAS cytokine-mediated signaling pathway
GO:0019882 IEA antigen processing and presentation
GO:0030670 TAS phagocytic vesicle membrane
GO:0030881 ISS beta-2-microglobulin binding
GO:0031901 TAS early endosome membrane
GO:0042590 TAS antigen processing and presentation of exogenous peptide antigen via MHC class I
GO:0042605 ISS peptide antigen binding
GO:0042612 ISS:IEA MHC class I protein complex
GO:0046977 IDA TAP binding
GO:0050776 TAS regulation of immune response
GO:0060333 TAS interferon-gamma-mediated signaling pathway
GO:0060337 TAS type I interferon signaling pathway
GO:0071556 TAS integral component of lumenal side of endoplasmic reticulum membrane

Homologs

No Homologs available.

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