C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: long intergenic non-protein coding RNA 1272
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000224397 LINC01272 9606 + 20:50267486-50279795 lincRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000421019 LINC01272-004 50277534-50278415 lincRNA
  ENST00000422459 LINC01272-003 50276317-50279037 lincRNA
  ENST00000425497 LINC01272-001 50267486-50279795 lincRNA
  ENST00000445003 LINC01272-002 50267499-50278427 lincRNA
  ENST00000622604 LINC01272-201 50275670-50279795 lincRNA

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000421019ENST00000422459ENST00000425497ENST00000445003ENST00000622604
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000421019 N/A N/A N/A N/A N/A N/A 0.611±0.00 N/A N/A N/A N/A N/A N/A
ENST00000422459 N/A N/A 0.080±0.00 N/A N/A N/A 0.355±0.00 1.376±0.00 3.715±0.66 N/A 0.486±0.06 0.827±0.41 N/A
ENST00000425497 1.362±0.00 0.460±0.00 N/A 0.786±0.00 0.446±0.00 0.155±0.00 0.688±0.00 N/A 1.501±0.00 N/A 1.137±0.70 0.953±0.28 0.281±0.00
ENST00000445003 4.539±0.00 0.843±0.00 N/A 2.473±0.00 0.728±0.00 0.704±0.00 N/A N/A 22.371±0.00 0.569±0.00 0.541±0.00 2.689±0.03 0.302±0.00
ENST00000622604 N/A N/A N/A N/A N/A 0.350±0.00 0.690±0.00 N/A N/A N/A 0.244±0.00 N/A 0.040±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00087E CIL_00087E_0001 VISTA 20:49719805-50323644
CIL_0007ZW CIL_0007ZW_0001 VISTA 20:50090256-50696209
CIL_0007H3 CIL_0007H3_0001 CGP 20:50190734-50585241

Gene Ontology

No GO terms available.

Homologs

No Homologs available.

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