C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ataxin 1-like
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000224470 ATXN1L 9606 + 16:71845991-71885268 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000427980 ATXN1L-001 71845991-71857333 protein_coding
  ENST00000565676 ATXN1L-002 71846069-71848418 retained_intron
  ENST00000569119 ATXN1L-003 71846048-71885268 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000427980
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000427980 12.545±0.00 7.945±0.00 5.625±0.00 5.661±2.43 7.316±3.37 6.295±2.04 3.714±2.35 5.861±3.36 6.626±3.81 5.410±1.86 3.069±1.56 5.166±2.79 6.250±0.88 12.635±0.68

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0003677 IEA DNA binding
GO:0003723 IEA RNA binding
GO:0005515 IPI:IEA protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0030198 IEA extracellular matrix organization
GO:0042995 IEA cell projection
GO:0048286 IEA lung alveolus development
GO:1902035 IEA positive regulation of hematopoietic stem cell proliferation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000086977 ATXN1L ataxin 1-like protein_coding Danio_rerio
ENSMUSG00000069895 Atxn1l ataxin 1-like protein_coding Mus_musculus

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