C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ataxin 1-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000427980 ATXN1L-001 ENSG00000224470 9606 + 16:71845991-71857333 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000427980
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000427980 12.545±0.00 7.945±0.00 5.625±0.00 5.661±2.43 7.316±3.37 6.295±2.04 3.714±2.35 5.861±3.36 6.626±3.81 5.410±1.86 3.069±1.56 5.166±2.79 6.250±0.88 12.635±0.68

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0003677 IEA DNA binding
GO:0003723 IEA RNA binding
GO:0005515 IPI:IEA protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0030198 IEA extracellular matrix organization
GO:0042995 IEA cell projection
GO:0048286 IEA lung alveolus development
GO:1902035 IEA positive regulation of hematopoietic stem cell proliferation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000093162 Atxn1l-201 protein_coding Mus_musculus 0 3474

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